Job Description Q47690 Confidence 44.04% Date Thu Jan 5 12:37:05 GMT 2012 Rank 92 Aligned Residues 138 % Identity 19% Template c1b74A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate racemase; PDBTitle: glutamate racemase from aquifex pyrophilus Resolution 2.30 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		P	Y	G	A	Y	L	A	D	G	S	E	Y	R	G	D	Y	H	C	S	V	E	A	F	Q	A	F	H	R	P	R	V	E	A	L	L	D	A	G	A	D	L	L	A	C	.	.	E	T	L	P	N	F	S	E	I	E	A	L	A	E	L	L	T	A	Y	P	R	A	R	A	W	F	S	F	T	L	R	D	S	E
Query Conservation																																														.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.							.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Sequence		P	Y	G	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	D	T	I	I	R	Y	S	L	E	C	A	G	F	L	K	D	K	G	V	D	I	I	V	V	A	C	N	T	A	S	A	Y	.	.	.	.	.	A	L	E	R	L	K	K	E	I	N	V	P	V	F	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.																		T	T	T		S													.	.	.	.	.									S	S	S				.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.														.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.						.	.	.	80	.	.	.	.	.	.	.	.	.	90
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	S	D	G	T	P	L	R	D	V	V	A	L	L	A	G	Y	P	Q	V	V	A	L	G	I	N	C	I	A	L	E	N	T	T	A	A	L	Q	H	L	H	G	L	T	V	L	P	L	V	V	Y	P	N	S	G	E	H	Y	D	A	V	S	K	T	W	H	H	H	G	E	H	C	A	Q	L	A	D	Y	L
Query Conservation
Alig confidence		.	.	.	.	.																																																														.	.
Template Conservation		.	.	.	.	.																																																														.	.
Template Sequence		.	.	.	.	.	G	V	I	E	P	G	V	K	E	A	L	K	K	S	R	N	K	K	I	G	V	I	G	T	P	A	T	V	K	S	G	A	Y	Q	R	K	L	E	E	G	G	A	D	V	F	A	K	A	C	P	L	F	A	P	L	A	E	E	G	L	L	.	.	E	G	E	I	T	R	K	V	V	E	H	Y
Template Known Secondary structure		.	.	.	.	.		S													S	S	S																						T	T	S												T	T	T			T	T	T	S	.	.	S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.																																																														.	.
Template SS confidence
							91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.
		282	.	.	.	.	.	.	.	290		.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		P	Q	W	Q	A	A	G	A	R	.	L	I	G	G	C
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		L	K	E	F	K	G	K	I	D	T	L	I	L	G	C
Template Known Secondary structure		T	T	T	T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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