Return to main results Retrieve Phyre Job Id

Job DescriptionP69222
Confidence21.24%DateWed Jan 25 15:21:01 GMT 2012
Rank97Aligned Residues57
% Identity21%Templated2nn6h1
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution3.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40...... ...50.........60........
Predicted Secondary structure 











..










Query SS confidence 





































. .





















Query Sequence  MQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIR. . ILTGDKVTVELTPYDLSKGRIV
Query Conservation    
 
   
    
 
 
 

   

 
 




 

 ..
  

 
 

   

  




Alig confidence 










.
















.







..















.




Template Conservation 
 
 
  
   .
  


     
 
 

.           



 
 


  

 . 
 
 
Template Sequence  VVGRITEVQQK. RWKVETNSRLDSVLLLS. SMNELAMRGFLQEGDLISAEVQAVFS. DGAVS
Template Known Secondary structure 

TT.
SSSS
SS.



S
SS


T.TT
Template Predicted Secondary structure 

.



.












.


Template SS confidence 





























































   84.....90.... .....100.........110. ........120.........130....... ..140..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions