Return to main results Retrieve Phyre Job Id

Job DescriptionP69222
Confidence99.97%DateWed Jan 25 15:21:01 GMT 2012
Rank1Aligned Residues71
% Identity100%Templated1ah9a_
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70..
Predicted Secondary structure 




























Query SS confidence 






































































Query Sequence  AKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
Query Conservation   


  
  
 
   
    
 
 
 

   

 
 




 

 
  

 
 

   

  




 
 
Alig confidence 






































































Template Conservation   


  
  
 
   
    
 
 
 

   

 
 




 

 
  

 
 
    

  




 
 
Template Sequence  AKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
Template Known Secondary structure 

S




SSSTTS

SSGGGTT



TT



SS
TT
S


Template Predicted Secondary structure 




























Template SS confidence 






































































   1........10.........20.........30.........40.........50.........60.........70.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions