Job Description P69222 Confidence 54.54% Date Wed Jan 25 15:21:01 GMT 2012 Rank 57 Aligned Residues 68 % Identity 7% Template c3psiA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(239-1451) Resolution 3.30 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																				.	.	.	.							.
Query SS confidence																																				.	.	.	.							.
Query Sequence		E	D	N	I	E	M	Q	G	T	V	L	E	T	L	P	N	T	M	F	R	V	E	L	E	N	G	H	V	V	T	A	H	I	S	.	.	.	.	G	K	M	R	K	N	.	Y	I	R	I	L	T	G	D	K	V	T	V	E	L	T	P	Y	D	L	S	K	G	R	I	V	F	R	S	R
Query Conservation																																				.	.	.	.							.
Alig confidence																					.															.	.	.	.							.
Template Conservation																					.
Template Sequence		F	K	G	S	I	I	P	V	R	V	E	R	F	W	H	N	D	I	I	.	C	T	T	N	S	E	V	E	C	V	V	N	A	Q	R	H	A	G	A	Q	L	R	R	P	A	N	E	I	Y	E	I	G	K	T	Y	P	A	K	V	I	Y	I	D	Y	A	N	I	T	A	E	V	S	L	L
Template Known Secondary structure			T	T												S	S				.				T	T	S							T	T	S	S	S	S	T	T	S		S		S	T	T	T	S		T	T												G	G	G	T
Template Predicted Secondary structure																					.
Template SS confidence
		1133	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.		.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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