Job Description P69222 Confidence 27.39% Date Wed Jan 25 15:21:01 GMT 2012 Rank 85 Aligned Residues 59 % Identity 15% Template c3h0gS_ PDB info PDB header:transcription Chain: S: PDB Molecule:dna-directed rna polymerase ii subunit rpb7; PDBTitle: rna polymerase ii from schizosaccharomyces pombe Resolution 3.65 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.												.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	M	Q	G	T	V	L	E	T	L	P	N	T	M	F	R	V	E	L	E	.	.	N	G	H	V	V	T	A	H	I	S	G	K	M	R	K	N	Y	I	R	.	.	.	.	.	.	.	.	.	.	.	I	L	T	G	D	K	V	T	V	E	L	T	P	Y	D	L	S	K	G	R	I
Query Conservation																						.	.																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.					.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		V	V	D	A	I	V	T	T	V	N	K	M	G	F	F	.	A	N	I	G	P	L	N	V	F	V	S	S	H	L	V	P	P	D	M	K	F	D	P	T	A	N	P	P	N	Y	S	G	E	D	Q	V	I	E	K	G	S	N	V	R	L	K	I	V	G	T	R	T	D	A	T	E	I
Template Known Secondary structure												T	T				.			B	T	T	B						G	G	G	S		T	T				B	S	S	S	S	S		B			S	S	S					S	S													S	S	S
Template Predicted Secondary structure																	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions