Job Description P69222 Confidence 35.89% Date Wed Jan 25 15:21:01 GMT 2012 Rank 76 Aligned Residues 58 % Identity 12% Template c2z0sA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:probable exosome complex rna-binding protein 1; PDBTitle: crystal structure of putative exosome complex rna-binding2 protein Resolution 3.20 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.									.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.
Query Sequence		M	Q	G	T	V	L	E	T	L	P	N	T	M	F	R	V	E	L	E	N	G	H	V	V	T	A	H	I	S	G	.	.	.	.	.	.	.	.	K	M	R	K	N	Y	I	R	I	L	T	G	D	K	V	T	V	E	L	T	P	Y	D	L	S	K	G	R	I	V
Query Conservation																																.	.	.	.	.	.	.	.
Alig confidence														.																		.	.	.	.	.	.	.	.																										.
Template Conservation														.																																																			.
Template Sequence		V	I	G	L	I	Q	S	V	G	I	M	N	.	W	F	V	D	I	N	S	P	Y	V	A	V	L	S	V	Q	D	F	L	G	R	P	F	N	P	A	V	D	D	M	Q	S	L	L	K	V	G	D	Y	I	K	A	K	V	V	A	F	D	K	T	.	R	S	P	L
Template Known Secondary structure											S	S		.						S	S	S	S											T	S				T	T	T	T			T	T	S	S		T	T												T	T	.	S
Template Predicted Secondary structure														.																																																			.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions