Job Description P69222 Confidence 67.79% Date Wed Jan 25 15:21:01 GMT 2012 Rank 45 Aligned Residues 63 % Identity 27% Template c2pmzE_ PDB info PDB header:translation, transferase Chain: E: PDB Molecule:dna-directed rna polymerase subunit e; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus Resolution 3.40 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	D	N	I	E	M	Q	G	T	V	L	E	T	L	P	N	T	M	F	R	V	E	L	E	N	G	H	V	V	T	A	H	I	S	G	K	M	R	K	N	Y	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	T	G	D	K	V	T	V	E	L	T	P	Y	D	L	S	K	G	R	I	V
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.					.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.					.
Template Sequence		V	V	Q	E	V	V	E	G	E	V	L	Q	V	D	N	Y	G	I	F	.	V	N	L	G	.	P	M	D	G	L	V	H	I	S	Q	I	T	D	D	T	L	K	Y	D	N	V	R	G	I	I	F	G	E	K	S	K	K	V	I	Q	K	G	D	K	V	R	A	R	V	I	S	V	A	S	T	V	P	R	I	A
Template Known Secondary structure			S	S												S	S				.				S	.	S	S						S	T	T	T		S	S					B	T	T	T	T	B				S	S	S						T	T									B
Template Predicted Secondary structure																					.					.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions