Job Description P69222 Confidence 64.70% Date Wed Jan 25 15:21:01 GMT 2012 Rank 47 Aligned Residues 59 % Identity 25% Template c1go3E_ PDB info PDB header:transferase Chain: E: PDB Molecule:dna-directed rna polymerase subunit e; PDBTitle: structure of an archeal homolog of the eukaryotic rna2 polymerase ii rpb4/rpb7 complex Resolution 1.75 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.														.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	M	Q	G	T	V	L	E	T	L	P	N	T	M	F	R	V	E	L	E	N	G	H	V	V	T	A	H	I	S	G	K	M	R	K	N	Y	I	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	L	T	G	D	K	V	T	V	E	L	T	P	Y	D	L	S	K	G	R	I	V
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.				.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.				.
Template Sequence		L	I	E	G	E	V	V	D	V	V	E	F	G	S	F	.	V	R	L	.	G	P	L	D	G	L	I	H	V	S	Q	I	M	D	D	Y	V	S	Y	D	P	K	A	I	I	G	K	E	T	G	K	V	L	E	I	G	D	Y	V	R	A	R	I	V	A	I	S	L	K	A	S	K	I	A
Template Known Secondary structure												T	T				.				.	S	S	S						G	G	G	S		S	S												T	T	T						T	T
Template Predicted Secondary structure																	.				.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions