Job Description P13656 Confidence 99.94% Date Thu Jan 5 11:33:39 GMT 2012 Rank 4 Aligned Residues 235 % Identity 19% Template d2hvma_ SCOP info TIM beta/alpha-barrel (Trans)glycosidases Type II chitinase Resolution 1.80

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		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.							.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.
Query Sequence		I	P	D	L	A	A	L	A	K	N	H	N	V	N	H	F	T	L	A	F	V	V	S	K	D	A	N	T	C	L	P	T	W	G	T	A	Y	G	M	.	.	.	.	.	.	Q	N	Y	A	Q	Y	S	K	I	K	A	L	R	E	A	G	G	D	V	M	L	S	I	G	G	A	N	N	A	P	L	A	A	S	C
Query Conservation																																									.	.	.	.	.	.
Alig confidence																															.	.									.	.	.	.	.	.
Template Conservation																															.	.
Template Sequence		E	G	T	L	T	Q	T	C	S	T	R	K	Y	S	Y	V	N	I	A	F	L	N	K	F	G	N	G	Q	T	.	.	P	Q	I	N	L	A	G	H	C	N	P	A	A	G	G	C	T	I	V	S	N	G	I	R	S	C	Q	I	Q	G	I	K	V	M	L	S	L	G	G	G	I	G	S	Y	T	L	A	S	Q
Template Known Secondary structure		G									T	S			S											S	T	T			.	.						G	G	G				G	G	G	T	T	T	T											T	T										S	S							S
Template Predicted Secondary structure																															.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		674	.	.	.	.	.	680	.	.	.	.	.	.											.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.
Query Sequence		K	N	V	D	D	L	M	Q	H	Y	Y	D	I	.	.	.	.	.	.	.	.	.	.	V	D	N	L	N	L	K	V	L	D	F	D	I	E	G	T	W	V	A	D	Q	A	S	I	E	R	R	N	L	A	V	K	K	V	Q	D	K	W	K	S	E	G	K	D	I	A	I	W	Y	T	L	P	I	L	P	T	G
Query Conservation															.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.							.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.							.	.	.	.
Template Sequence		A	D	A	K	N	V	A	D	Y	L	W	N	N	F	L	G	G	K	S	S	S	R	P	L	G	D	A	V	L	D	G	I	D	F	D	I	E	H	G	S	T	L	Y	W	D	D	L	A	R	Y	L	S	A	Y	.	.	.	.	.	.	.	S	K	Q	G	K	K	.	.	.	.	V	Y	L	T	A	A	P	Q	C
Template Known Secondary structure															T	S	S	S			S			T	T		S				S								S	S			S	S											G	.	.	.	.	.	.	.	G	G	G	S	S		.	.	.	.								B	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.							.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.								.	.	.	.	.	150					.	.	.	.	.	.	.	.	.
		744	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	P	E	G	M	N	V	L	S	D	A	K	A	K	G	V	E	L	A	G	V	N	V	M	T	M	D	Y	G	N	A	I	C	Q	S	A	N	T	E	G	Q	N	I	H	G	K	C	A	T	S	A	I	A	N	L	H	S	Q	L	K	G	L	H	P	N	K	S	D	A	E	I	D	A	M	M	G	T	T	P
Query Conservation
Alig confidence														.	.	.																								.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.						.
Template Conservation														.	.	.																								.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.						.
Template Sequence		P	F	P	D	R	Y	L	G	T	A	L	N	.	.	.	T	G	L	F	D	Y	V	W	V	Q	F	Y	N	N	P	P	C	Q	Y	S	S	G	N	.	.	.	.	.	.	.	.	.	.	I	N	N	I	I	N	S	W	N	R	W	T	T	S	I	N	A	G	K	.	.	.	.	.	.	I	F	L	G	L	.	P
Template Known Secondary structure		S	S	S		T	T	T						.	.	.	T	T			S							S	S		G	G	G	S		B	T	T	B	.	.	.	.	.	.	.	.	.	.																		S		.	.	.	.	.	.						.
Template Predicted Secondary structure														.	.	.																								.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.						.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.											.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.							.	.	.	.	.		.
		824	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850		.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		M	V	G	V	N	D	V	Q	G	E	V	F	Y	L	S	D	A	R	L	V	M	Q	D	A	Q	K	R	.	N	L	G	M	V	G	I	W	S	I	A	R	D	L	P	G	G
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		A	A	P	E	A	A	G	S	G	Y	V	P	P	D	V	L	I	S	R	I	L	P	E	I	K	K	S	P	K	Y	G	G	V	M	L	W	S	K	F	Y	D	D	K	N	G
Template Known Secondary structure		S	S	G	G	G	S	S	S											T	T					T	T	S	T	T																T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions