Return to main results Retrieve Phyre Job Id

Job DescriptionP13656
Confidence99.56%DateThu Jan 5 11:33:39 GMT 2012
Rank18Aligned Residues257
% Identity18%Templated1w9pa1
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Type II chitinase
Resolution1.7

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   583......590.........600.. .......610.........620.........630... ......640.......
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Query Sequence  AWPKHVYAPYVDFTLNTIPD. LAALAKNHNVNHFTLAFVVSKDANTCLPTWG. . . . . . . . . . . . . . TAYGMQNYAQYSKI
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Template Sequence  ASSGYRSVVYFVNWAIYGRNHNPQDLPVERLTHVLYAFANVRPETGEVYMTDSWADIEKHYPGDSWSDTGNNVYGCIKQL
Template Known Secondary structure 
B

BGGGGSTT


GGGS
GGG
S
TTT

S
T


TT

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SS


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   3940.........50.........60.........70.........80.........90.........100.........110........
 
   648.650... ......660........ .670.........680.........690.........700... ......710.........720
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Query Sequence  KALREA. . GGDVMLSIGGANNAP. . . . LAASCKNVDDLMQHYYDIVDNLNLKVLDFDIEGTW. VADQASIERRNLAVKKV
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Template Sequence  YLLKKQNRNLKVLLSIGGWTYSPNFAPAASTDAGRKNFAKTAVKLLQDLGFDGLDIDWEYPENDQQANDFVLLLKEVRTA
Template Known Secondary structure 
TT

TTTGGGTST
S
S


S
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   119120.........130.........140.........150.........160.........170.........180.........190........
 
   721...... ..730.........740.........750.........760.........770..... ....780......
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Query Sequence  QDKWKSE. . . GKDIAIWYTLPILPTGLTPEGMNVLSDAKAKGVELAGVNVMTMDYGNA. . . . . . . . . . . ICQSANTEGQN
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Template Sequence  LDSYSAANAGGQHFLLTVASPA. . . . . . GPDKIKVLHLKDMDQQLDFWNLMAYDYAGSFSSLSGHQANVYNDTSNPLSTP
Template Known Secondary structure  STT




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TT
S




SSTTSSS


SS
SS

TT
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S
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   199200.........210.........220 .........230.........240.........250.........260.........270..
 
   787..790.........800.........810.........820.........830.........840.........850.........860......
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Query Sequence  IHGKCATSAIANLHSQLKGLHPNKSDAEIDAMMGTTPMVGVNDVQGEVFYLSDARLVMQDAQKRNLGMVGIWSIARDLPG
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Template Sequence  FNTQTALDLYRAGGVPANKIV. . . . . . . . . . . LGMP. . . . . . . . . . . LDNPQVANLKSGYIKSLGLGGAMWWDSSSDKTG
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TT

GGG......................


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   273......280.........290... .... ..300.........310.........320.........330
 
   867
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Query Sequence  G
Query Conservation 
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Template Sequence  S
Template Known Secondary structure  G
Template Predicted Secondary structure 
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   393
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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