Return to main results Retrieve Phyre Job Id

Job DescriptionP13656
Confidence65.60%DateThu Jan 5 11:33:39 GMT 2012
Rank72Aligned Residues191
% Identity18%Templated1v6wa2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   641........650......... 660.........670.........680..... ....690. ...... ..700.........
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Query Sequence  YAQYSKIKALREAGGDVML. SIGGANNAPLAASCKNVDDLMQHYYD. . . . IVDNLN. . LKVLDF. . . . DIEGTWVADQAS
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Template Sequence  SAGDRVYNWAVQNGKQVRGHTLAWHSQQPGWMQSLSGSTLRQAMIDHINGVMGHYKGKIAQWDVVNEAFSDDGSGGRRDS
Template Known Secondary structure  TT
SSS

T

TTTT
S

B
SSSS

B

S
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   62.......70.........80.........90.........100.........110.........120.........130.........140.
 
   710.... .....720.........730.........740........ .750.........760....... ..770.........780...
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Query Sequence  IERRN. . LAVKKVQDKWKSEGKDIAIWYTLPILPTGLTPEG. . . MNVLSDAKAKGVELAGVNV. MTMDYGNAICQSANTE
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Template Sequence  NLQRTGNDWIEVAFRTARAADPAAKLCYNDYNIENWTWAKTQGVYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNS. . . . .
Template Known Secondary structure  T
TT
TTSSS

STTST





BTTB


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   142.......150.........160.........170.........180.........190.........200.........210......
 
   784.....790.........800.........810.........820.........830.........840.........850. ........860..
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Query Sequence  GQNIHGKCATSAIANLHSQLKGLHPNKSDAEIDAMMGTTPMVGVNDVQGEVFYLSDARLVMQDAQKRN. LGMVGIWSIAR
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Template Sequence  . . . . . . . . . . . . . . . . . . NFRTTL. . . . . . QNFAALGVDVAITELDIQGA. . SSSTYAAVTNDCLAVSRCLGITVWGV. R
Template Known Secondary structure  ..................T......TTT
TT
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TTS
S.B
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   217..220.. .......230.........240.. .......250.........260........ .
 
   863
Predicted Secondary structure 
Query SS confidence 
Query Sequence  D
Query Conservation 
Alig confidence 
Template Conservation 
Template Sequence  D
Template Known Secondary structure  G
Template Predicted Secondary structure 
Template SS confidence 
   270
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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