Return to main results Retrieve Phyre Job Id

Job DescriptionP13656
Confidence30.95%DateThu Jan 5 11:33:39 GMT 2012
Rank102Aligned Residues190
% Identity17%Templated1v0la_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution0.98

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   643......650......... 660.........670.........680.........690 ...... ...700.........
Predicted Secondary structure 


.







......



......








Query SS confidence 
















.






























. . . . . .





. . . . . .












Query Sequence  QYSKIKALREAGGDVML. SIGGANNAPLAASCKNVDDLMQHYYDIVDNL. . . . . . NLKVLD. . . . . . FDIEGTWVADQAS
Query Conservation      
  

  



 
.




 
  

  
  
  




  


 
......
   

......




    
   
Alig confidence 
















.






























......





......












Template Conservation   
  
      

      
      
 
                
     

 
 
  


 


              
Template Sequence  ADRVYNWAVQNGKQVRGHTLAWHSQQPGWMQSLSGSALRQAMIDHINGVMAHYKGKIVQWDVVNEAFADGSSGARRDSNL
Template Known Secondary structure  TT

SSS

T

TTTT
S

B
SSSS

B

S
Template Predicted Secondary structure 


































Template SS confidence 















































































   64.....70.........80.........90.........100.........110.........120.........130.........140...
 
   710.........720.........730..... ....740.........750.........760....... ..770.........780.....
Predicted Secondary structure 




...













.
















Query SS confidence 

























. . .































.

















Query Sequence  IERRNLAVKKVQDKWKSEGKDIAIWY. . . TLPILPTGLTPEGMNVLSDAKAKGVELAGVNV. MTMDYGNAICQSANTEGQ
Query Conservation    

  

  

    
  
 
 

 ...



 
 

   
   
  
   

    


.





            
Alig confidence 

























...































.










.......
Template Conservation                
    
 
 
                     
  
   
   
 

 
 
         .......
Template Sequence  QRSGNDWIEVAFRTARAADPSAKLCYNDYNVENWTWAKTQAMYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNS. . . . . . .
Template Known Secondary structure  T
TT
TTSSS

STTST





BTTB


T.......
Template Predicted Secondary structure 






























.......
Template SS confidence 















































































   144.....150.........160.........170.........180.........190.........200.........210......
 
   786...790.........800.........810.........820.........830.........840.........850. ........860....
Predicted Secondary structure 
























.






Query SS confidence 

































































.












Query Sequence  NIHGKCATSAIANLHSQLKGLHPNKSDAEIDAMMGTTPMVGVNDVQGEVFYLSDARLVMQDAQKRN. LGMVGIWSIARDL
Query Conservation    

  

 

     

       


  
  







 

   



  

  
  

    .

 

 

 


 
Alig confidence  ................





......
















..


















.








.


Template Conservation  ................     
......        

 


 
 ..   

               
 
   
  . 
 
Template Sequence  . . . . . . . . . . . . . . . . NFRTTL. . . . . . QNFAALGVDVAITELDI. . QGAPASTYANVTNDCLAVSRCLGITVWGV. RDS
Template Known Secondary structure  ................T......TTT
..TT

T
TTS
S.BGG
Template Predicted Secondary structure  ......................





..










.


Template SS confidence 















































































   217..220.. .......230......... 240.........250.........260........ .270.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions