Return to main results Retrieve Phyre Job Id

Job DescriptionP13656
Confidence60.95%DateThu Jan 5 11:33:39 GMT 2012
Rank73Aligned Residues154
% Identity16%Templated1tuxa_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   677..680.........690. ...... ..700.........710... ......720.........730.........740........
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Query Sequence  DDLMQHYYDIVDNLN. . LKVLDF. . . . DIEGTWVADQASIERR. NLAVKKVQDKWKSEGKDIAIWYTLPILPTGLTPEG.
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Template Sequence  NVMKNHITTIMTRYIGKIRAWDVVNEAFNEDGSLRQTVFNNVIGEDYIPIAFRTARAADPNAKLYINDYNLDSASKPKTS
Template Known Secondary structure  TTTT
SS
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T
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   106...110.........120.........130.........140.........150.........160.........170.........180.....
 
   749750.........760.........770.........780.........790.........800.........810.........820.. ...
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Query Sequence  . . MNVLSDAKAKGVELAGVNVMTMDYGNAICQSANTEGQNIHGKCATSAIANLHSQLKGLHPNKSDAEIDAMMGTT. PMV
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Template Sequence  AIVKRVKKWRAAGVPIDGIGSQTHLSAGQGA. . . . . . . . . . . . . . . . . . . . . . . . SIDAAL. . . . . . PNLASAGTPEVAI
Template Known Secondary structure  TT






TTT..............................TT

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   186...190.........200.........210...... ...220.. .......230.....
 
   826...830.........840.........850. ........860...
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Query Sequence  GVNDVQGEVFYLSDARLVMQDAQKRN. LGMVGIWSIARD
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Template Sequence  TELDIAGA. . TSTDYVDVVNACLDVDSCIGITVWGV. AD
Template Known Secondary structure  TT
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   236...240... ......250.........260......... 270.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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