Return to main results Retrieve Phyre Job Id

Job DescriptionP13656
Confidence77.29%DateThu Jan 5 11:33:39 GMT 2012
Rank64Aligned Residues190
% Identity16%Templated1i1wa_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution0.89

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   641........650....... ..660...... ...670.........680.........690. ........700 .......
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Query Sequence  YAQYSKIKALREAGGDV. . . . MLSIGGANN. . APLAASCKNVDDLMQHYYDIVDNLN. . LKVLDFDIE. . . . . GTWVADQ
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Template Sequence  AGADYLVNWAQQNGKLIRGHTLVWHSQLPSWVSSITDKNTLTNVMKNHITTLMTRYKGKIRAWDVVNEAFNEDGSLRQTV
Template Known Secondary structure  T

STT

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TTTS
SS
B
TTSSB


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   64.....70.........80.........90.........100.........110.........120.........130.........140...
 
   708.710.........720.........730.........740........ .750.........760.........770.........780....
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Query Sequence  ASIERRNLAVKKVQDKWKSEGKDIAIWYTLPILPTGLTPEG. . . MNVLSDAKAKGVELAGVNVMTMDYGNAICQSANTEG
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Template Sequence  FLNVIGEDYIPIAFQTARAADPNAKLYINDYNLDSASYPKTQAIVNRVKKWRAAGVPIDGIGSQTHLSA. . . . . . . . . . .
Template Known Secondary structure  T
TT
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   144.....150.........160.........170.........180.........190.........200.........210..
 
   785....790.........800.........810.........820.. .......830.........840.........850. ........860..
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Query Sequence  QNIHGKCATSAIANLHSQLKGLHPNKSDAEIDAMMGTT. PMVGVNDVQGEVFYLSDARLVMQDAQKRN. LGMVGIWSIAR
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Template Sequence  . . . . . . . . . GQGASVLQALPLLA. . . . . . . . . . SAGTPEVAITELDVAGA. . SSTDYVNVVNACLNVSSCVGITVWGV. A
Template Known Secondary structure  .........TT..........TT

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   213......220...... ...230.........240... ......250.........260......... 270
 
   863
Predicted Secondary structure 
Query SS confidence 
Query Sequence  D
Query Conservation 
Alig confidence 
Template Conservation 
Template Sequence  D
Template Known Secondary structure  G
Template Predicted Secondary structure 
Template SS confidence 
   271
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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