Job Description P13656 Confidence 99.65% Date Thu Jan 5 11:33:39 GMT 2012 Rank 15 Aligned Residues 266 % Identity 14% Template d1edqa2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Type II chitinase Resolution 1.55

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		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.		.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
Predicted Secondary structure																																				.																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	W	T	G	T	K	E	R	V	G	T	P	K	K	A	W	P	K	H	V	Y	A	P	Y	V	D	F	T	L	N	T	I	P	D	.	L	A	A	L	A	K	N	H	N	V	N	H	F	T	L	A	F	V	V	S	K	D	A	N	T	C	L	P	T	W	G	T	A	Y	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																				.																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	K	E	P	L	L	E	K	N	K	P	Y	K	Q	N	S	G	K	V	V	G	S	Y	F	V	E	W	G	V	Y	G	R	N	F	T	V	D	K	I	P	A	Q	N	L	T	H	L	L	Y	G	F	I	P	I	C	G	G	N	G	I	N	D	S	L	K	E	I	E	G	S	F	Q	A	L	Q	R	S	C	Q
Template Known Secondary structure									T	T				B				S	S									G	G	G	G	S	T	T				G	G	G	S		G	G	G		S									B				T	T	T	S	G	G	G	G	G	S	T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
																												637	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.			.	.	.	.	.	.	660	.	.	.	.	.	.	.	.				.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.																.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.																.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	Q	N	Y	A	Q	Y	S	K	I	K	A	L	R	E	A	.	.	G	G	D	V	M	L	S	I	G	G	A	N	N	A	P	.	.	.	L	A	A	S	C	K	N	V	D	D	L	M	Q	H	Y	Y	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.																.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.																.	.	.
Template Conservation
Template Sequence		G	R	E	D	F	K	V	S	I	H	D	P	F	A	A	L	Q	K	A	Q	K	G	V	T	A	W	D	D	P	Y	K	G	N	F	G	Q	L	M	A	L	K	Q	A	H	P	D	L	K	I	L	P	S	I	G	G	W	T	L	S	D	P	F	F	F	M	G	D	K	V	K	R	D	R	F	V	G	S	V	K	E
Template Known Secondary structure		T			T	T	S	B			S							T	S		B	T	T	B		S	T	T		S	S															T	T										S	S	S		G	G	G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		686	.	.	.	690		.	.	.	.	.	.	.	.	.	700											.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.		720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.
Predicted Secondary structure							.											.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence							.											.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		I	V	D	N	L	.	N	L	K	V	L	D	F	D	I	E	.	.	.	.	.	.	.	.	.	.	G	T	W	V	A	D	Q	A	S	I	E	R	R	N	L	A	V	K	K	.	V	Q	D	K	W	K	S	E	G	K	D	I	A	I	W	Y	T	L	P	I	L	P	T	G	L	T	P	E	G	M	N	V	L	S
Query Conservation							.											.	.	.	.	.	.	.	.	.	.																				.
Alig confidence							.											.	.	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		F	L	Q	T	W	K	F	F	D	G	V	D	I	D	W	E	F	P	G	G	K	G	A	N	P	N	L	G	S	P	Q	D	G	E	T	Y	V	L	L	M	K	E	L	R	A	M	L	D	Q	L	S	V	E	T	G	R	K	Y	E	L	T	S	A	I	S	A	G	K	D	K	I	D	K	V	A	Y	N	V	A	Q
Template Known Secondary structure							T	T									S		T	T	S		S	S		T	T				T	T																								T												S					T	T	S						G
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		754	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.									.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.				.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.																											.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.																											.	.	.
Query Sequence		D	A	K	A	K	G	V	E	L	A	G	V	N	V	M	T	M	D	Y	G	N	A	I	.	.	.	.	.	.	.	.	C	Q	S	A	N	T	E	G	Q	N	I	H	G	K	C	A	T	S	A	I	A	N	L	H	S	Q	.	.	.	L	K	G	L	H	P	N	K	S	D	A	E	I	D	A	M	M	G	T	T
Query Conservation																									.	.	.	.	.	.	.	.																											.	.	.
Alig confidence			.	.	.	.	.	.																	.	.	.	.	.	.	.	.																											.	.	.						.	.	.	.	.	.	.	.	.	.	.				.
Template Conservation			.	.	.	.	.	.																																																											.	.	.	.	.	.	.	.	.	.	.				.
Template Sequence		N	.	.	.	.	.	.	S	M	D	H	I	F	L	M	S	Y	D	F	Y	G	A	F	D	L	K	N	L	G	H	Q	T	A	L	N	A	P	A	W	K	P	D	T	A	Y	T	T	V	N	G	V	N	A	L	L	A	Q	G	V	K	P	G	K	I	V	.	.	.	.	.	.	.	.	.	.	.	V	G	T	.
Template Known Secondary structure		G	.	.	.	.	.	.	G		S									S	S		T	T		S	S	S				S	S		S	S			T	T		T	T		S														T			G	G	G			.	.	.	.	.	.	.	.	.	.	.				.
Template Predicted Secondary structure			.	.	.	.	.	.																																																											.	.	.	.	.	.	.	.	.	.	.				.
Template SS confidence
		380							.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.												.	440	.
		823	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	V	G	V	N	D	V	Q	G	E	V	F	Y	L	S	D	A	R	L	V	M	Q	D	A	Q	K	R	N	L	G	M	V	G	I	W	S	I	A	R	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	A	M	D	A	R	S	V	Q	A	K	G	K	Y	V	L	D	K	Q	L	G	G	L	F	S	W	E	I	D	A	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.																		T									G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions