Job Description P13656 Confidence 99.50% Date Thu Jan 5 11:33:39 GMT 2012 Rank 26 Aligned Residues 247 % Identity 15% Template c3simA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein, family 18 chitinase; PDBTitle: crystallographic structure analysis of family 18 chitinase from crocus2 vernus Resolution 2.10 Å

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		588	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.			.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.				.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.			.	.	.	.	.	.	660
Predicted Secondary structure																												.	.																							.	.	.																			.	.
Query SS confidence																												.	.																							.	.	.																			.	.
Query Sequence		V	Y	A	P	Y	V	D	F	T	L	N	T	I	P	D	L	A	A	L	A	K	N	H	N	V	N	.	.	H	F	T	L	A	F	V	V	S	K	D	A	N	T	C	L	P	T	W	G	T	A	.	.	.	Y	G	M	Q	N	Y	A	Q	Y	S	K	I	K	A	L	R	E	A	.	.	G	G	D	V	M	L	S
Query Conservation																												.	.																							.	.	.																			.	.
Alig confidence																												.	.																							.	.	.																			.	.
Template Conservation
Template Sequence		L	F	V	E	Y	I	G	Y	P	L	F	S	G	V	K	F	S	D	V	P	I	N	P	H	I	T	K	F	Q	F	V	L	S	F	A	V	D	Y	T	A	S	S	P	H	T	S	T	N	G	K	F	N	V	F	W	D	S	S	I	L	G	P	D	Q	I	S	A	I	K	S	S	H	P	N	V	R	V	A	V	S
Template Known Secondary structure								S		S	T	T					G	G	G	S				T	T		S											S	B		S	S	S	S			B		T	T						S		T	T	T	S													T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		661	.	.	.	.							.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.
Query Sequence		I	G	G	A	N	.	.	.	.	.	.	N	A	P	L	A	A	S	C	K	N	V	D	D	L	M	Q	H	Y	Y	D	I	V	D	N	L	N	L	K	V	L	D	F	D	I	E	G	T	W	V	A	D	Q	A	S	I	E	R	R	N	L	A	V	K	K	V	Q	D	K	W	K	S	E	G	K	D	I	A	I	W
Query Conservation							.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.																																													.	.	.																						.
Template Conservation																																																									.	.	.																						.
Template Sequence		L	G	G	A	S	V	G	S	N	T	V	Q	F	Q	A	A	S	V	D	S	W	V	S	N	A	V	T	S	L	T	R	I	I	Q	R	Y	N	L	D	G	I	D	I	D	Y	E	H	F	Q	N	T	D	K	N	T	.	.	.	F	A	E	C	I	G	R	L	I	T	T	L	K	K	N	G	V	I	S	F	A	.
Template Known Secondary structure					S			T	T								S																				T	T												T	T	S					.	.	.															T	T	S		S			.
Template Predicted Secondary structure																																																									.	.	.																						.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		735	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	L	P	I	L	P	T	G	L	T	P	E	G	M	N	V	L	S	D	A	K	A	K	G	V	E	L	A	G	V	N	V	M	T	M	D	Y	G	N	A	I	C	Q	S	A	N	T	E	G	Q	N	I	H	G	K	C	A	T	S	A	I	A	N	L	H	S	Q	L	K	G	L	H	P	N	K	S	D	A	E
Query Conservation
Alig confidence		.	.	.																			.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation		.	.	.																			.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Sequence		.	.	.	S	I	S	P	F	P	S	V	D	E	Y	Y	L	A	L	F	N	E	.	.	.	.	.	Y	K	N	A	I	N	H	I	N	Y	Q	F	K	A	Y	D	S	.	.	.	.	.	.	.	.	.	.	.	S	T	S	V	D	K	F	L	G	Y	Y	N	N	A	A	S	K	Y	K	G	G	N	.	.	.	.
Template Known Secondary structure		.	.	.						G	G	G											.	.	.	.	.	S	G	G	G								G	G	G	S		T	.	.	.	.	.	.	.	.	.	.	.	T																	T	T	T	S		.	.	.	.
Template Predicted Secondary structure		.	.	.																			.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template SS confidence
					158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.						.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.												.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		815	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840		.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		I	D	A	M	M	G	T	T	P	M	V	G	V	N	D	V	Q	G	E	V	F	Y	L	S	D	A	.	R	L	V	M	Q	D	A	Q	K	R	N	L	G	M	V	G	I	W	S	I	A	R	D	L	P	G	G
Query Conservation																												.
Alig confidence		.	.	.	.	.	.																					.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	V	L	I	S	F	S	T	G	P	H	P	G	G	L	P	V	D	K	G	F	F	D	A	A	T	S	L	K	N	K	G	K	L	H	G	I	A	V	W	T	A	D	T	S	K	S	S	D
Template Known Secondary structure		.	.	.	.	.	.								S	S	S			S	S		T	T	T	T											T	T														G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions