Job Description P13656 Confidence 29.82% Date Thu Jan 5 11:33:39 GMT 2012 Rank 106 Aligned Residues 266 % Identity 15% Template c3ndyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endoglucanase d; PDBTitle: the structure of the catalytic and carbohydrate binding domain of2 endoglucanase d from clostridium cellulovorans Resolution 2.10 Å

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		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.										.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660				.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		I	P	D	L	A	A	L	A	K	N	H	N	V	N	H	F	T	L	A	F	V	V	S	K	D	A	N	T	C	L	P	T	W	G	T	A	Y	G	M	Q	N	Y	A	.	.	.	.	.	.	.	.	.	Q	Y	S	K	I	K	A	L	R	E	A	G	G	D	V	M	L	S	.	.	.	I	G	G	A	N	N	A
Query Conservation																																													.	.	.	.	.	.	.	.	.																			.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	H	A	M	I	N	K	I	K	E	A	G	F	N	T	L	R	L	P	V	.	.	.	.	.	.	.	.	.	.	.	T	W	D	G	H	M	G	A	A	P	E	Y	T	I	D	Q	T	W	M	K	R	V	E	E	I	A	N	Y	A	F	D	N	D	M	Y	V	I	I	N	L	H	H	E	N	E	W	L	K	P
Template Known Secondary structure													T									.	.	.	.	.	.	.	.	.	.	.			T	T	S	B			T	T	T			B																	T	T	T									S		T	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.												.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		668	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690			.	.	.	.	.	.	.	.	.	700	.	.	.														.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.
Predicted Secondary structure																									.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	A	A	S	C	K	N	V	D	D	L	M	Q	H	Y	Y	D	I	V	D	N	L	.	.	N	L	K	V	L	D	F	D	I	E	G	T	W	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	D	Q	A	S	I	E	R	R	N	L	A	V	K	K	V	Q	D	K	W	K	S	E	G	K	D	I	A
Query Conservation																									.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	Y	A	N	E	A	Q	V	K	A	Q	L	T	K	V	W	T	Q	I	A	N	N	F	K	K	Y	G	D	H	L	I	F	E	T	M	N	E	P	R	P	V	G	A	S	L	Q	W	T	G	G	S	Y	E	N	R	E	V	V	N	R	Y	N	L	T	A	V	N	A	I	R	A	T	G	G	N	N	A	T	R	Y
Template Known Secondary structure		S	T	T	T																			T	T	T			T	T					S		S						S	G	G	G	T	T	S																								T		G	G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		733	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	W	Y	T	L	P	I	L	P	T	G	L	T	P	E	G	M	N	V	L	S	D	A	K	A	K	G	V	E	L	A	G	V	N	V	M	T	M	D	Y	G	N	A	I	C	Q	S	A	N	T	E	G	Q	N	I	H	G	K	C	A	T	S	A	I	A	N	L	H	S	Q	L	K	G	L	H	P	N	K	S	D
Query Conservation
Alig confidence			.	.																																.	.	.	.																																						.	.	.	.	.
Template Conservation			.	.																																.	.	.	.																																						.	.	.	.	.
Template Sequence		I	.	.	M	V	P	T	L	A	A	S	A	M	S	T	T	I	N	D	L	V	I	P	N	N	D	S	K	V	I	V	S	L	H	.	.	.	.	M	Y	S	P	Y	F	F	A	M	D	I	N	G	T	S	S	W	G	S	D	Y	D	K	S	S	L	D	S	E	F	D	A	V	Y	N	K	F	.	.	.	.	.
Template Known Secondary structure			.	.					G	G	G			S						T				G	G	G		T	T							.	.	.	.				S					T		T	T	S		S																						T	.	.	.	.	.
Template Predicted Secondary structure			.	.																																.	.	.	.																																						.	.	.	.	.
Template SS confidence
		196			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.					.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		813	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.				840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.
Query SS confidence																													.	.	.
Query Sequence		A	E	I	D	A	M	M	G	T	T	P	M	V	G	V	N	D	V	Q	G	E	V	F	Y	L	S	D	.	.	.	A	R	L	V	M	Q	D	A	Q	K	R	N	L	G	M	V	G	I	W	S	I	A	R	D	L	P	G	G	T	N	L	S	P	E	F	H	G	L	T	K	E	Q	A	P	K	Y	A	F	S	E
Query Conservation																													.	.	.
Alig confidence		.	.	.	.																								.	.	.																	.			.	.	.	.
Template Conservation		.	.	.	.																																											.			.	.	.	.
Template Sequence		.	.	.	.	V	K	N	G	R	A	V	V	I	G	E	M	G	S	I	N	K	N	N	T	A	A	R	V	T	H	A	E	Y	Y	A	K	S	A	K	A	R	G	L	T	P	I	.	W	W	.	.	.	.	D	N	G	Y	S	V	A	G	K	A	E	T	F	G	I	F	N	R	S	N	L	T	W	D	A	P	E
Template Known Secondary structure		.	.	.	.	G	G	G	T													S	S																		T	T	T					.			.	.	.	.			S				T	T	S	T	T							T	T	T	T			S	S
Template Predicted Secondary structure		.	.	.	.																																											.			.	.	.	.
Template SS confidence
						265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.					.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		890	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	A	P	F	T	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	M	K	A	F	I	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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