Job Description P13656 Confidence 45.25% Date Thu Jan 5 11:33:39 GMT 2012 Rank 82 Aligned Residues 238 % Identity 12% Template c3jugA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-mannanase; PDBTitle: crystal structure of endo-beta-1,4-mannanase from the alkaliphilic2 bacillus sp. n16-5 Resolution 1.60 Å

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		604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.		.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		A	A	L	A	K	N	H	N	V	N	H	F	T	L	A	F	V	V	S	K	D	A	N	T	C	L	P	T	W	G	T	A	Y	G	M	Q	N	Y	A	Q	Y	S	K	.	I	K	A	L	R	E	A	G	G	D	V	M	L	S	I	G	G	A	N	N	A	P	L	A	A	S	C	K	N	V	D	D	L	M	Q	H
Query Conservation																																													.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.																	.																					.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Template Sequence		I	P	A	I	A	E	Q	G	A	N	T	I	R	I	V	L	.	.	.	.	.	.	.	.	.	.	.	S	D	G	G	Q	W	E	K	D	D	I	D	T	V	R	E	V	I	E	L	A	E	Q	N	K	M	V	A	V	V	E	V	H	D	A	T	G	.	.	.	R	D	S	R	S	D	L	D	R	A	V	D	Y
Template Known Secondary structure								T	T		S							.	.	.	.	.	.	.	.	.	.	.			S	S	S	S																	T	T	T									T	T	T	T	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.												.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.
		683	.	.	.	.	.	.	690			.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		Y	Y	D	I	V	D	N	L	.	.	N	L	K	V	L	D	F	D	I	E	G	T	W	V	A	D	Q	A	S	I	E	R	R	N	L	A	V	K	K	V	Q	D	K	W	K	S	E	G	K	D	I	A	I	W	Y	T	L	P	I	L	P	T	G	L	T	P	E	G	M	N	V	L	S	D	A	K	A	K	G	V
Query Conservation										.	.
Alig confidence										.	.												.																																.	.
Template Conservation																							.																																.	.
Template Sequence		W	I	E	M	K	D	A	L	I	G	K	E	D	T	V	I	I	N	I	A	N	.	E	W	Y	G	S	W	D	G	A	A	W	A	D	G	Y	I	D	V	I	P	K	L	R	D	A	G	L	T	H	T	L	.	.	M	V	D	A	A	G	W	G	Q	Y	P	Q	S	I	H	D	Y	G	Q	D	V	F	N	A	D
Template Known Secondary structure					T					T	T		T	T	T							T	.	T				S	S																			T	T			S			.	.					B	T	T	T	T	B	T													T
Template Predicted Secondary structure																							.																																.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		761	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	G	V	N	V	M	T	M	D	Y	G	N	A	I	C	Q	S	A	N	T	E	G	Q	N	I	H	G	K	C	A	T	S	A	I	A	N	L	H	S	Q	L	K	G	L	H	P	N	K	S	D	A	E	I	D	A	M	M	G	T	T	P	M	V	G	V	N	D	V	Q	G	E	V	F	Y	L	S	D	A
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.											.	.	.
Template Sequence		P	L	K	N	T	I	F	S	I	H	M	Y	E	Y	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	A	N	T	V	R	S	N	I	D	R	V	I	.	.	.	.	.	.	.	.	.	.	D	Q	D	L	A	L	V	I	G	E	.	.	.	F	G	H	R	H	T	D	V	D	E
Template Known Secondary structure		T	T										S	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S													.	.	.	.	.	.	.	.	.	.	T	T	T								.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.											.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.																		230	.	.	.	.	.	.	.	.	.	240	.	.	.											.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.
		841	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	V	M	Q	D	A	Q	K	R	N	L	G	M	V	G	I	W	S	I	A	R	D	L	P	G	G	T	N	L	S	P	E	F	H	G	L	T	K	E	Q	A	P	K	Y	A	F	S	E	I
Query Conservation
Alig confidence																	.						.
Template Conservation																	.						.
Template Sequence		D	T	I	L	S	Y	S	E	E	T	G	T	G	W	L	.	A	W	S	W	K	.	G	N	S	A	E	W	D	Y	L	D	L	S	E	D	W	A	G	N	H	L	T	D	W	G	N	R	I	V
Template Known Secondary structure												T					.		S		S	S	.				G	G	G	G	G	G		S	B	S	S	T	T	S	S	S	B
Template Predicted Secondary structure																	.						.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions