Return to main results Retrieve Phyre Job Id

Job DescriptionP13656
Confidence33.94%DateThu Jan 5 11:33:39 GMT 2012
Rank97Aligned Residues80
% Identity13%Templatec3itcA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:renal dipeptidase; PDBTitle: crystal structure of sco3058 with bound citrate and glycerol
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   644.....650.........660. ........670... ......680......
Predicted Secondary structure 


..........................





...........

Query SS confidence 

















. . . . . . . . . . . . . . . . . . . . . . . . . .











. . . . . . . . . . .












Query Sequence  YSKIKALREAGGDVMLSI. . . . . . . . . . . . . . . . . . . . . . . . . . GGANNAPLAASC. . . . . . . . . . . KNVDDLMQHYYDI
Query Conservation     
  

  



 


..........................


 
  

  
...........  
  




  
Alig confidence 

















..........................











...........












Template Conservation 

 




  





     

                                            


     



 
Template Sequence  DDVLERLSANGGMAMVTFVPKFVLQAAVDWTAEADDNMRAHGFHHLDSSPEAMKVHAAFEERVPRPVATVSTVADHLDHM
Template Known Secondary structure  T




TT

TT

SS




B
Template Predicted Secondary structure 



























Template SS confidence 















































































   227..230.........240.........250.........260.........270.........280.........290.........300......
 
   687..690..... ....700.........710.........720...
Predicted Secondary structure 



....








Query SS confidence 








. . . .



























Query Sequence  VDNLNLKVL. . . . DFDIEGTWVADQASIERRNLAVKKVQDK
Query Conservation 

 

   
....





    
     

  

  

  
Alig confidence 








....



























Template Conservation    
 
 










    
 

      
 
   
  
Template Sequence  REVAGVDHLGIGGDYDGTPFTPDGLGDVSGYPNLIAELLDR
Template Known Secondary structure 
GGG


BTS
S


BT
SSGGGT
Template Predicted Secondary structure 




















Template SS confidence 








































   307..310.........320.........330.........340.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions