Job Description P13656 Confidence 99.39% Date Thu Jan 5 11:33:39 GMT 2012 Rank 39 Aligned Residues 244 % Identity 17% Template c3fxyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:acidic mammalian chitinase; PDBTitle: acidic mammalian chinase, catalytic domain Resolution 2.00 Å

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		613	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.			.	.	.	.	660	.	.	.	.	.	.	.						.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.
Predicted Secondary structure																																													.	.													.	.	.	.	.
Query SS confidence																																													.	.													.	.	.	.	.
Query Sequence		N	H	F	T	L	A	F	V	V	S	K	D	A	N	T	C	L	P	T	W	G	T	A	Y	G	M	Q	N	Y	A	Q	Y	S	K	I	K	A	L	R	E	A	G	G	.	.	D	V	M	L	S	I	G	G	A	N	N	A	.	.	.	.	.	P	L	A	A	S	C	K	N	V	D	D	L	M	Q	H	Y	Y	D
Query Conservation																																													.	.													.	.	.	.	.
Alig confidence																						.	.	.	.	.	.																		.	.													.	.	.	.	.
Template Conservation																						.	.	.	.	.	.
Template Sequence		T	H	L	I	Y	A	F	A	G	M	Q	N	N	E	I	T	T	I	E	W	.	.	.	.	.	.	N	D	V	T	L	Y	Q	A	F	N	G	L	K	N	K	N	S	Q	L	K	T	L	L	A	I	G	G	W	N	F	G	T	A	P	F	T	A	M	V	S	T	P	E	N	R	Q	T	F	I	T	S	V	I	K
Template Known Secondary structure		S											T	T						S	T	.	.	.	.	.	.	T											G	G	G	G		T	T										T	T	T		S								S	S
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		686	.	.	.	690	.	.	.	.	.	.	.	.	.	700						.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.			.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.																						.	.
Query SS confidence																	.	.	.	.	.																						.	.
Query Sequence		I	V	D	N	L	N	L	K	V	L	D	F	D	I	E	.	.	.	.	.	G	T	W	V	A	D	Q	A	S	I	E	R	R	N	L	A	V	K	K	V	Q	.	.	D	K	W	K	S	E	G	K	D	I	A	I	W	Y	T	L	P	I	L	P	T	G	L	T	P	E	G	M	N	V	L	S	D	A	K	A	K
Query Conservation																	.	.	.	.	.																						.	.
Alig confidence																	.	.	.	.	.																						.	.																		.	.	.	.	.
Template Conservation																																																														.	.	.	.	.
Template Sequence		F	L	R	Q	Y	E	F	D	G	L	D	F	D	W	E	Y	P	G	S	R	G	S	P	P	Q	D	K	H	L	F	T	V	L	V	Q	E	M	R	E	A	F	E	Q	E	A	K	Q	I	N	K	P	R	L	M	V	T	A	A	V	A	.	.	.	.	.	A	G	I	S	N	I	Q	S	G	Y	E	I	P	Q	L
Template Known Secondary structure							T		S							S		T	T	S	T	T			T	T																								T	S											.	.	.	.	.		S
Template Predicted Secondary structure																																																														.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		759	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.							.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	E	L	A	G	V	N	V	M	T	M	D	Y	G	N	.	.	.	.	.	.	A	I	C	Q	S	A	N	T	E	G	Q	N	I	H	G	K	C	A	T	S	A	I	A	N	L	H	S	Q	L	K	G	L	H	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	Q	Y	L	D	Y	I	H	V	M	T	Y	D	L	H	G	S	W	E	G	Y	T	G	E	N	S	P	L	Y	K	Y	P	T	D	T	G	S	N	A	Y	L	N	V	D	Y	V	M	N	Y	W	K	D	N	G	A	P	A	E	K	L	I	V	G	F	P	T	Y	G	H	N	F	I	L	S	N	P	S	N	T	G
Template Known Secondary structure			T	T		S									S	S		G	G	G	S	B				S	S		S	S			T	T			G	G	G	G	G		S											T	T			G	G	G							S								S	S	T	T			S
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
																						810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.												.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	D	A	E	I	D	A	M	M	G	T	T	P	M	V	G	V	N	D	V	Q	G	E	V	F	Y	.	.	.	.	.	.	.	.	.	.	.	L	S	D	A	R	L	V	M	Q	D	A	Q	K	R	N	L	G	M	V	G	I	W
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	A	P	T	S	G	A	G	P	A	G	P	Y	A	K	E	S	G	I	W	A	Y	Y	E	I	C	T	F	L	K	N	G	A	T	Q	G	W	D	A	P	Q	E	V	P	Y	A	Y	Q	G	N	V	W	V	G	Y	D	N	V	K	S	F	D	I	K	A	Q	W	L	K	H	N	K	F	G	G	A	M	V	W
Template Known Secondary structure		T	T		B									T	T	T			T	T													T	T							G	G	G	T							T	T																					T	T
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		859	860	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	A	R	D	L	P	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	D	L	D	D	F	T	G
Template Known Secondary structure			G	G	G	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		361	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions