Job Description P13656 Confidence 34.81% Date Thu Jan 5 11:33:39 GMT 2012 Rank 95 Aligned Residues 192 % Identity 13% Template c3emzA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endo-1,4-beta-xylanase; PDBTitle: crystal structure of xylanase xynb from paenibacillus2 barcinonensis complexed with a conduramine derivative Resolution 2.08 Å

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		641	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.					.	.	660	.	.	.	.	.	.								.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.										.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.										.	.	.	.	.	.	.
Query Sequence		Y	A	Q	Y	S	K	I	K	A	L	R	E	A	G	G	D	V	.	.	.	.	M	L	S	I	G	G	A	N	N	.	.	.	.	.	.	.	A	P	L	A	A	S	C	K	N	V	D	D	L	M	Q	H	Y	Y	D	I	V	D	N	L	N	L	K	V	L	D	F	D	I	E	G	T	W	V	A	D	Q	A	S
Query Conservation																			.	.	.	.										.	.	.	.	.	.	.
Alig confidence																			.	.	.	.										.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	A	D	E	I	V	D	F	A	V	A	R	G	I	G	V	R	G	H	T	L	V	W	H	N	Q	T	P	A	W	M	F	E	D	A	S	G	G	T	A	S	R	E	M	M	L	S	R	L	K	Q	H	I	D	T	V	V	G	R	Y	K	D	Q	I	Y	A	W	D	V	V	N	E	A	I	E	D	K	T	D
Template Known Secondary structure													T	T	T								S	B		S	S	S			G	G	G	G	B		T	T	S	S	B																					T	T	T	T		S									B		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		710	.	.	.	.	.	.										.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.		.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.																				.
Query SS confidence									.	.	.	.	.	.	.	.	.																				.
Query Sequence		I	E	R	R	N	L	A	.	.	.	.	.	.	.	.	.	V	K	K	V	Q	D	K	W	K	S	E	G	K	D	I	A	I	W	Y	.	T	L	P	I	L	P	T	G	L	T	P	E	G	M	N	V	L	S	D	A	K	A	K	G	V	E	L	A	G	V	N	V	M	T	M	D	Y	G	N	A	I	C	Q	S
Query Conservation									.	.	.	.	.	.	.	.	.																				.
Alig confidence									.	.	.	.	.	.	.	.	.																				.																																											.	.
Template Conservation																																																																																.	.
Template Sequence		L	I	M	R	D	T	K	W	L	R	L	L	G	E	D	Y	L	V	Q	A	F	N	M	A	H	E	A	D	P	N	A	L	L	F	Y	N	D	Y	N	E	T	D	P	V	K	R	E	K	I	Y	N	L	V	R	S	L	L	D	Q	G	A	P	V	H	G	I	G	M	Q	G	H	W	N	I	H	G	P	S	.	.
Template Known Secondary structure				B									T		T	T														T	T	S							S	S		S	S																		T														T	T	B	S		.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.																		.	.	.	.	.	.	.	840	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	N	T	E	G	Q	N	I	H	G	K	C	A	T	S	A	I	A	N	L	H	S	Q	L	K	G	L	H	P	N	K	S	D	A	E	I	D	A	M	M	G	T	T	P	M	V	G	V	N	D	V	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	F	Y	L	S	D	A	R	L
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	D	E	I	R	Q	A	I	.	.	.	.	.	.	E	R	Y	A	S	L	D	V	Q	L	H	V	T	E	L	D	L	S	V	F	R	H	E	D	Q	R	T	D	L	T	E	P	T	A	E	M	A	E	L	Q	Q	K	R	Y	E	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.					T	T	S												S	S		T	T							S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template SS confidence
																						220	.	.	.	.	.	.	.							.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		843	.	.	.	.	.	.	850	.			.	.	.	.	.	.	.	.	860
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		V	M	Q	D	A	Q	K	R	N	.	.	L	G	M	V	G	I	W	S	I
Query Conservation											.	.
Alig confidence											.	.
Template Conservation
Template Sequence		I	F	G	L	F	R	E	Y	R	S	N	I	T	S	V	T	F	W	G	V
Template Known Secondary structure									T	T	T	T							S	S	S
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions