Job Description P13656 Confidence 99.89% Date Thu Jan 5 11:33:39 GMT 2012 Rank 5 Aligned Residues 230 % Identity 14% Template c3d5hA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:haementhin; PDBTitle: crystal structure of haementhin from haemanthus multiflorus2 at 2.0a resolution: formation of a novel loop on a tim3 barrel fold and its functional significance Resolution 2.00 Å

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		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	D	L	A	A	L	A	K	N	H	N	V	N	H	F	T	L	A	F	V	V	S	K	D	A	N	T	C	L	P	T	W	G	T	A	Y	G	M	Q	N	Y	A	Q	Y	S	K	I	K	A	L	R	E	A	G	G	D	V	M	L	S	I	G	G	A	N	N	A	P	L	A	A	S	C	K	N	V	D	D	L
Query Conservation
Alig confidence																													.	.
Template Conservation																													.	.
Template Sequence		E	R	S	L	E	A	T	C	D	T	G	N	Y	A	Y	V	I	I	G	F	L	N	T	F	G	G	G	.	.	Q	T	P	A	L	D	I	S	G	H	S	P	S	G	L	E	P	Q	I	K	H	C	Q	S	K	N	V	K	V	L	L	S	I	G	G	P	K	G	P	Y	S	L	D	S	R	S	D	A	N	D	L
Template Known Secondary structure		S									T	S			S												T	T	.	.							S	T	T			T	G	G	G										T	T										S	S		S	B				S
Template Predicted Secondary structure																													.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		680	.	.	.	.	.	.	.	.	.	690	.													.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	Q	H	Y	Y	D	I	V	D	N	L	N	.	.	.	.	.	.	.	.	.	.	.	.	L	K	V	L	D	F	D	I	E	G	T	W	V	A	D	Q	A	S	I	E	R	R	N	L	A	V	K	K	V	Q	D	K	W	K	S	E	G	K	D	I	A	I	W	Y	T	L	P	I	L	P	T	G	L	T	P	E
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																						.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.																						.	.	.	.
Template Sequence		A	V	Y	L	F	N	N	F	L	L	P	P	G	H	S	E	N	R	P	F	G	N	A	V	L	D	G	I	D	F	H	I	E	H	G	.	.	.	.	.	.	.	G	P	S	Q	Y	Q	L	L	A	N	I	L	S	S	F	R	L	A	G	T	E	.	.	.	.	F	A	L	T	A	A	P	Q	C	V	Y	P	D
Template Known Secondary structure										T	S				S	S	S			T	T	T	T				S								S	S	.	.	.	.	.	.	.		S	T	T													T	T	T			.	.	.	.								B	S	S	S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.																						.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.								.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.					.	150	.	.	.	.	.	.	.	.	.	160	.
		748	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	N	V	L	S	D	A	K	A	K	G	V	E	L	A	G	V	N	V	M	T	M	D	Y	G	N	A	I	C	Q	S	A	N	T	E	G	Q	N	I	H	G	K	C	A	T	S	A	I	A	N	L	H	S	Q	L	K	G	L	H	P	N	K	S	D	A	E	I	D	A	M	M	G	T	T	P	M	V	G	V
Query Conservation
Alig confidence					.	.	.																									.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.																									.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	N	L	.	.	.	G	T	V	I	N	S	A	T	F	D	A	I	W	V	Q	F	Y	N	N	P	Q	C	S	Y	.	.	.	.	.	.	.	S	S	G	N	A	E	A	L	M	N	A	W	R	E	W	S	M	K	A	R	T	.	.	.	.	.	.	.	.	.	.	.	K	K	V	F	L	G	F	P	A	H	P
Template Known Secondary structure		T	T	T	.	.	.					T	T	T			S								S		T	T	T	S		.	.	.	.	.	.	.	B	T	T	B	T																S	.	.	.	.	.	.	.	.	.	.	.	S								S	S	T
Template Predicted Secondary structure					.	.	.																									.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.				.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.								.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.												210	.	.	.	.	.	.	.	.	.	220
		828	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.			.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		N	D	V	Q	G	E	V	F	Y	L	S	D	A	R	L	V	M	Q	.	.	D	A	Q	K	R	N	L	G	M	V	G	I	W	S	I	A	R	D
Query Conservation																				.	.
Alig confidence																				.	.
Template Conservation
Template Sequence		D	A	A	G	S	G	Y	M	P	P	E	K	V	K	F	H	V	F	P	A	A	K	K	S	Y	K	F	G	G	I	M	L	W	D	S	Y	W	D
Template Known Secondary structure		T	S	S	S	S												T					T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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