Job Description P13656 Confidence 99.03% Date Thu Jan 5 11:33:39 GMT 2012 Rank 51 Aligned Residues 235 % Identity 15% Template c3cz8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative sporulation-specific glycosylase ydhd; PDBTitle: crystal structure of putative sporulation-specific glycosylase ydhd2 from bacillus subtilis Resolution 2.20 Å

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		612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.						.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.				.	.	680	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.																	.	.	.
Query SS confidence																																																				.	.	.	.	.																	.	.	.
Query Sequence		V	N	H	F	T	L	A	F	V	V	S	K	D	A	N	T	C	L	P	T	W	G	T	A	Y	G	M	Q	N	Y	A	Q	Y	S	K	I	K	A	L	R	E	A	G	G	D	V	M	L	S	I	.	.	.	.	.	G	G	A	N	N	A	P	L	A	A	S	C	K	N	V	D	.	.	.	D	L	M	Q	H	Y
Query Conservation																																																				.	.	.	.	.																	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.																				.	.	.	.	.																	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.
Template Sequence		S	S	S	I	S	I	F	E	Y	H	I	A	P	N	G	D	I	A	N	Q	L	N	.	.	.	.	.	.	.	.	.	D	A	A	A	I	E	T	T	W	Q	R	R	V	T	P	L	A	T	I	T	N	L	T	S	G	G	F	S	T	E	I	V	H	Q	V	L	N	N	P	T	A	R	T	N	L	V	N	N	I
Template Known Secondary structure												B		T	T	S		B					S	.	.	.	.	.	.	.	.	.											T	T												T	T												T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.										.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		684	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	I	V	D	N	L	N	L	K	V	L	D	F	D	I	E	G	T	W	V	A	D	Q	A	S	I	E	R	R	N	L	A	V	K	K	V	Q	D	K	W	K	S	E	G	K	D	I	A	I	W	Y	T	L	P	I	L	P	T	G	L	T	P	E	G	M	N	V	L	S	D	A	K	A	K	G	V	E	L	A
Query Conservation
Alig confidence																																								.	.	.																																		.	.	.	.
Template Conservation																																								.	.	.																																		.	.	.	.
Template Sequence		Y	D	L	V	S	T	R	G	Y	G	G	V	T	I	D	F	E	Q	V	S	A	A	D	R	D	L	F	T	G	F	L	R	Q	L	R	D	R	L	.	.	.	Q	A	G	G	Y	V	L	T	I	A	V	P	A	K	T	S	D	N	I	P	W	L	R	G	Y	D	Y	G	G	I	G	A	V	.	.	.	.	V	N
Template Known Secondary structure									T		S								S			G	G	G																.	.	.			T	T											S		S			G	G	G	T	T										.	.	.	.		S
Template Predicted Secondary structure																																								.	.	.																																		.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.					.	.
		764	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.																															.	.	.	.	.	.	.	810	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	N	V	M	T	M	D	Y	G	N	A	I	C	Q	S	A	N	T	E	G	Q	N	I	H	G	K	C	A	T	S	A	I	A	N	L	H	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	G	L	H	P	N	K	S	D	A
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	M	F	I	M	A	Y	D	W	H	H	A	G	S	E	P	G	P	V	A	P	I	T	E	I	R	R	T	I	E	F	T	I	A	Q	V	P	S	R	K	I	I	I	G	V	P	L	Y	G	Y	D	W	I	I	P	Y	Q	P	G	T	V	A	S	A	I	S	N	Q	N	A	I	E	R	A	M	R	Y	Q	A	P
Template Known Secondary structure										S	S		T	T	S		S			S	S													T	T	T	S		G	G	G							S							S	S			T	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		814	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.						.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		E	I	D	A	M	M	G	T	T	P	M	V	G	V	N	D	V	Q	G	E	V	F	.	.	.	.	.	Y	L	S	D	A	R	L	V	M	Q	D	A	Q	K	R	N	L	G	M	V	G	I	W	S	I	A	R
Query Conservation																								.	.	.	.	.
Alig confidence																								.	.	.	.	.
Template Conservation
Template Sequence		I	Q	Y	S	A	E	Y	Q	S	P	F	F	R	Y	S	D	Q	Q	G	R	T	H	E	V	W	F	E	G	V	R	S	M	S	R	K	M	Q	I	V	R	E	Y	R	L	Q	A	I	G	A	W	Q	L	T	L
Template Known Secondary structure						T	T	T	T									T	T	S																							T	T		S
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions