Return to main results Retrieve Phyre Job Id

Job DescriptionP13656
Confidence23.33%DateThu Jan 5 11:33:39 GMT 2012
Rank126Aligned Residues50
% Identity4%Templatec3cfzA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:upf0100 protein mj1186; PDBTitle: crystal structure of m. jannaschii periplasmic binding2 protein moda/wtpa with bound tungstate
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   715....720.........730.........740.........750.........760.........770..
Predicted Secondary structure 






















Query SS confidence 

























































Query Sequence  LAVKKVQDKWKSEGKDIAIWYTLPILPTGLTPEGMNVLSDAKAKGVELAGVNVMTMDY
Query Conservation   

  

    
  
 
 

 



 
 

   
   
  
   

    







Alig confidence 





















........



























Template Conservation        
  

   
 
 
   ........            
 
  


        
Template Sequence  VPFEEYEKMFEKEHPNVDVERE. . . . . . . . PAGSVACVRKIIDLGKKADILASADYSL
Template Known Secondary structure 
TT........
TS



SSSTT
Template Predicted Secondary structure 



........









Template SS confidence 

























































   50.........60.........70. ........80.........90.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions