Job Description P13656 Confidence 99.25% Date Thu Jan 5 11:33:39 GMT 2012 Rank 46 Aligned Residues 260 % Identity 12% Template c3bxwB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:chitinase domain-containing protein 1; PDBTitle: crystal structure of stabilin-1 interacting chitinase-like2 protein, si-clp Resolution 2.70 Å

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		592	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.			.	.	.	.	.			.	660	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.						.	.
Query SS confidence																																																																.	.						.	.
Query Sequence		Y	V	D	F	T	L	N	T	I	P	D	L	A	A	L	A	K	N	H	N	V	N	H	F	T	L	A	F	V	V	S	K	D	A	N	T	C	L	P	T	W	G	T	A	Y	G	M	Q	N	Y	A	Q	Y	S	K	I	K	A	L	R	E	A	.	.	G	G	D	V	M	.	.	L	S	I	G	G	A	N	N	A
Query Conservation																																																																.	.						.	.
Alig confidence																.																																					.	.	.	.								.	.						.	.
Template Conservation																.																																					.	.	.	.
Template Sequence		Y	V	T	P	W	N	S	H	G	Y	D	V	T	K	.	V	F	G	S	K	F	T	Q	I	S	P	V	W	L	Q	L	K	R	R	G	R	E	M	F	E	V	T	G	L	H	D	V	D	Q	G	W	.	.	.	.	M	R	A	V	R	K	H	A	K	G	L	H	I	V	P	R	L	L	F	E	D	W	T	Y	D
Template Known Secondary structure				B	T	T	B	T								.			G	G	G		S														T	T							G	G	G						.	.	.	.								S	S	S											S
Template Predicted Secondary structure																.																																					.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		668	.	670	.	.	.	.	.	.	.	.				.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		P	L	A	A	S	C	K	N	V	D	D	.	.	.	L	M	Q	H	Y	Y	D	I	V	D	N	L	N	L	K	V	L	D	F	D	I	E	G	T	W	V	A	D	Q	A	S	I	E	R	R	N	L	A	V	K	K	V	Q	D	K	W	K	S	E	G	K	D	I	A	I	W	Y	T	L	P	I	L	P	T	G	L
Query Conservation													.	.	.
Alig confidence													.	.	.																																.	.	.
Template Conservation																																															.	.	.
Template Sequence		D	F	R	N	V	L	D	S	E	D	E	I	E	E	L	S	K	T	V	V	Q	V	A	K	N	Q	H	F	D	G	F	V	V	E	V	W	N	Q	L	L	S	K	R	V	G	.	.	.	L	I	H	M	L	T	H	L	A	E	A	L	H	Q	A	R	L	L	A	L	L	V	I	P	P	A	I	T	P	G	T	D
Template Known Secondary structure								T																				T									G	G	G								.	.	.															T	T										S	B		T	T	T	S
Template Predicted Secondary structure																																															.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		745	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	P	E	G	M	N	V	L	S	D	A	K	A	K	G	V	E	L	A	G	V	N	V	M	T	M	D	Y	G	N	A	I	C	Q	S	A	N	T	E	G	Q	N	I	H	G	K	C	A	T	S	A	I	A	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																																	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																																	.	.
Template Sequence		Q	L	G	M	F	T	H	K	.	E	F	E	Q	L	A	P	V	L	D	G	F	S	L	M	T	Y	D	Y	S	T	A	H	Q	P	G	P	N	A	P	L	S	.	.	W	V	R	A	C	V	Q	V	L	D	P	K	S	K	W	R	S	K	I	L	L	G	L	N	F	Y	G	M	D	Y	A	T	S	K	D	A	R
Template Known Secondary structure		S	B		S	S				.						T	T	T		S											B	T	T	B				S	S				.	.										S	T	T		S	S	G	G	G							S	S						T	T	T	T
Template Predicted Secondary structure										.																																	.	.
Template SS confidence
		215	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
						800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.			.	.	.	.	.	.	840	.	.	.	.				.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.
Predicted Secondary structure		.	.	.	.																																			.	.												.	.	.
Query SS confidence		.	.	.	.																																			.	.												.	.	.
Query Sequence		.	.	.	.	H	S	Q	L	K	G	L	H	P	N	K	S	D	A	E	I	D	A	M	M	G	T	T	P	M	V	G	V	N	D	V	Q	G	E	.	.	V	F	Y	L	S	D	A	R	L	V	M	.	.	.	Q	D	A	Q	K	R	N	L	G	M	V	G	I	W	S	I	A	R	D
Query Conservation		.	.	.	.																																			.	.												.	.	.
Alig confidence		.	.	.	.																																			.	.												.	.	.									.
Template Conservation																																																																.
Template Sequence		E	P	V	V	G	A	R	Y	I	Q	T	L	K	D	H	R	P	R	M	V	W	D	S	Q	A	S	E	H	F	F	E	Y	K	K	S	R	S	G	R	H	V	V	F	Y	P	T	L	K	S	L	Q	V	R	L	E	L	A	R	E	L	G	V	.	G	V	S	I	W	E	L	G	Q	G
Template Known Secondary structure																			B					T	T	T	T									T	T	T																								T		.							T	T	S	S
Template Predicted Secondary structure																																																																.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions