Job Description P13656 Confidence 99.40% Date Thu Jan 5 11:33:39 GMT 2012 Rank 37 Aligned Residues 265 % Identity 15% Template c3alfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:chitinase, class v; PDBTitle: crystal structure of class v chitinase from nicotiana tobaccum Resolution 1.20 Å

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		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.			.	.	.	.	.	.	660	.	.	.
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		K	H	V	Y	A	P	Y	V	D	F	T	L	N	T	I	P	D	L	A	A	L	A	K	N	H	N	V	N	H	F	T	L	A	F	V	V	S	K	D	A	N	T	C	L	P	T	W	G	T	A	Y	G	M	Q	N	Y	A	Q	Y	S	K	I	K	A	L	R	E	A	.	.	G	G	D	V	M	L	S	I	G	G
Query Conservation																																																																						.	.
Alig confidence											.	.											.																						.	.	.	.																						.	.
Template Conservation											.	.											.																						.	.	.	.
Template Sequence		Q	N	V	K	G	G	Y	W	F	.	.	K	D	S	G	L	A	L	N	N	I	.	D	S	T	L	F	T	H	L	F	C	A	F	A	D	L	N	P	Q	L	N	Q	.	.	.	.	L	I	I	S	P	E	N	Q	D	S	F	R	Q	F	T	S	T	V	Q	R	K	N	P	S	V	K	T	F	L	S	I	A	G
Template Known Secondary structure											.	.	G	G	G				G	G	G		.		G	G	G		S											T	T	T	T		.	.	.	.																							T	T
Template Predicted Secondary structure											.	.											.																						.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.			10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		664	.	.						.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.				710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.																																												.	.	.
Query SS confidence					.	.	.	.	.																																												.	.	.
Query Sequence		A	N	N	.	.	.	.	.	A	P	L	A	A	S	C	K	N	V	D	D	L	M	Q	H	Y	Y	D	I	V	D	N	L	N	L	K	V	L	D	F	D	I	E	G	T	W	V	A	D	Q	A	S	.	.	.	I	E	R	R	N	L	A	V	K	K	V	Q	D	K	W	K	S	E	G	K	D	I	A	I	W	Y
Query Conservation					.	.	.	.	.																																												.	.	.
Alig confidence					.	.	.	.	.																																												.	.	.
Template Conservation
Template Sequence		G	R	A	N	S	T	A	Y	G	I	M	A	R	Q	P	N	S	R	K	S	F	I	D	S	S	I	R	L	A	R	Q	L	G	F	H	G	L	D	L	D	W	E	Y	P	L	S	A	A	D	M	T	N	L	G	T	L	L	N	E	W	R	T	A	I	N	T	E	A	R	N	S	G	R	A	A	L	L	L	T	A
Template Known Secondary structure		T	T	S											S																			T		S											S																											S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		736	.	.	.	740	.	.	.	.	.			.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790						.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.																																														.	.	.	.	.										.	.	.	.	.	.	.	.	.
Query SS confidence												.	.																																														.	.	.	.	.										.	.	.	.	.	.	.	.	.
Query Sequence		T	L	P	I	L	P	T	G	L	T	.	.	P	E	G	M	N	V	L	S	D	A	K	A	K	G	V	E	L	A	G	V	N	V	M	T	M	D	Y	G	N	A	I	C	Q	S	A	N	T	E	G	Q	N	I	H	G	K	.	.	.	.	.	C	A	T	S	A	I	A	N	L	.	.	.	.	.	.	.	.	.
Query Conservation												.	.																																														.	.	.	.	.										.	.	.	.	.	.	.	.	.
Alig confidence												.	.										.	.	.	.	.	.	.																														.	.	.	.	.										.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.
Template Sequence		A	V	S	N	S	P	R	V	N	G	L	N	Y	P	V	E	S	L	A	R	N	.	.	.	.	.	.	.	L	D	W	I	N	L	M	A	Y	D	F	Y	G	P	N	W	S	P	S	Q	T	N	S	H	A	Q	L	F	D	P	V	N	H	V	S	G	S	D	G	I	N	A	W	I	Q	A	G	V	P	T	K	K
Template Known Secondary structure					S	S	S			T	T												.	.	.	.	.	.	.		S									S	S		T	T	T	S	T	T	B				S	S		S			T	T	T			S											T	T			G	G	G
Template Predicted Secondary structure																							.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.								.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
																																											800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	Q	L	K	G	L	H	P	N	K	S	D	A	E	I	D	A	M	M	G	T	T	P	M	V	G	V	N	D	V	Q	G	E	V	F	Y	L	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.				.	.
Template Conservation																																																																					.				.	.
Template Sequence		L	V	L	G	I	P	F	Y	G	Y	A	W	R	L	V	N	A	N	I	H	G	L	R	A	P	A	A	G	K	S	N	V	G	A	V	D	D	G	S	M	T	Y	N	R	I	R	D	Y	I	V	E	S	R	A	T	T	V	Y	N	A	T	I	V	G	D	Y	C	.	Y	S	G	.	.	S	N	W	I	S	Y	D
Template Known Secondary structure								S								S		T	T			S	T	T		B						T	T	S		T	T	T																T							T	T	T	T					.			T	.	.	T
Template Predicted Secondary structure																																																																					.				.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.			.	.	.	300	.	.	.
		839	840	.	.	.	.	.				.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		D	A	R	L	V	M	Q	.	.	.	D	A	Q	K	R	N	L	G	M	V	G	I	W	S	I	A	R	D	L	P	G	G
Query Conservation									.	.	.
Alig confidence									.	.	.
Template Conservation
Template Sequence		D	T	Q	T	V	R	N	K	V	N	Y	V	K	G	R	G	L	L	G	Y	F	A	W	H	V	A	G	D	Q	N	W	G
Template Known Secondary structure																T	T		S							G	G	G	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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