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Job DescriptionP13656
Confidence76.48%DateThu Jan 5 11:33:39 GMT 2012
Rank65Aligned Residues142
% Identity25%Templatec2yfnA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha-galactosidase-sucrose kinase agask; PDBTitle: galactosidase domain of alpha-galactosidase-sucrose kinase,2 agask
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   592.......600.........610........ .620.........630.........640.........650.........660.
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Query Sequence  YVDFTLNTIPDLAALAKNHNVNHFTLA. . . FVVSKDANTCLPTWGTAYGMQNYAQYSKIKALREAGGDVMLSI. . . . . . .
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Template Sequence  YFDFTGDTIVDLAKEAASLGIDMVVMDDGWFGKRNDDNSSLGDWQVNETKLGGSLAELITRVHEQGMKFGIWIEPEMINE
Template Known Secondary structure  TT


TTT


SSSBTT
SSTTS
TT

SB
TS
TT

TT
S
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   340.........350.........360.........370.........380.........390.........400.........410.........
 
   662.......670........ .680.........690.........700 .........710.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . GGANNAPLAASCKNVDD. LMQHYYDIVDNLNLKVLDFDIE. . GTWVADQASIERRNLAV
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Template Sequence  DSDLYRAHPDWAIRIQGKKPVRSRNQLLLDFSRKEVRDCVFDQICVVLDQGKIDYVKWDMNRSMADVYAGNLSYDYVLGV
Template Known Secondary structure  SS
GGGB


TTS



BTTBB
TT
TTS





S


S

STT
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   420.........430.........440.........450.........460.........470.........480.........490.........
 
   718.720.........730...
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Query Sequence  KKVQDKWKSEGKDIAI
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Template Sequence  YDFMERLCSRYPDLLL
Template Known Secondary structure 
TT
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   500.........510.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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