Job Description P13656 Confidence 31.18% Date Thu Jan 5 11:33:39 GMT 2012 Rank 101 Aligned Residues 142 % Identity 21% Template c2xn1B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alpha-galactosidase; PDBTitle: structure of alpha-galactosidase from lactobacillus acidophilus ncfm2 with tris Resolution 2.30 Å

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		592	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.				.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.
Predicted Secondary structure																													.	.	.																																													.	.	.	.	.	.
Query SS confidence																													.	.	.																																													.	.	.	.	.	.
Query Sequence		Y	V	D	F	T	L	N	T	I	P	D	L	A	A	L	A	K	N	H	N	V	N	H	F	T	L	A	.	.	.	F	V	V	S	K	D	A	N	T	C	L	P	T	W	G	T	A	Y	G	M	Q	N	Y	A	Q	Y	S	K	I	K	A	L	R	E	A	G	G	D	V	M	L	S	I	G	.	.	.	.	.	.
Query Conservation																													.	.	.																																													.	.	.	.	.	.
Alig confidence																													.	.	.																																													.	.	.	.	.	.
Template Conservation
Template Sequence		Y	F	D	F	N	E	D	K	L	K	T	I	V	D	K	A	K	K	L	G	L	E	M	F	V	L	D	D	G	W	F	G	H	R	D	D	D	N	S	S	L	G	D	W	K	V	Y	K	K	K	F	P	N	G	L	G	H	F	A	D	Y	V	H	E	Q	G	L	K	F	G	L	W	F	E	P	E	M	I	S	Y
Template Known Secondary structure		T	T																		T								T	T	S	B	T	T		S	S	T	T	S		T	T			S	B		T	T	T		T	T												T	T									T	T				S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
																								663	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.		680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700											.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																						.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																						.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	N	N	A	P	L	A	A	S	C	K	N	V	D	D	L	.	M	Q	H	Y	Y	D	I	V	D	N	L	N	L	K	V	L	D	F	D	I	E	.	.	.	.	.	.	.	.	.	.	G	T	W	V	A	D	Q	A	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																						.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	S	N	L	Y	K	E	H	P	D	Y	L	M	H	V	P	G	R	K	P	C	P	S	R	N	Q	Y	V	L	E	L	G	R	K	E	V	R	D	N	I	F	E	Q	M	V	K	I	L	D	S	K	K	I	D	Y	I	K	W	D	M	N	R	S	L	S	D	I	Y	E	S	D	L	P	A	D	Q	Q	G	E	A
Template Known Secondary structure		S	S							G	G	G	B				T	T	S					B	T	T	B			B		T	T	S																T	T	S											S				S				T	T	S		G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.
		710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	R	R	N	L	A	V	K	K	V	Q	D	K	W	K	S	E	G	K	D	I	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	H	R	Y	V	L	G	Y	Y	D	L	L	N	K	L	V	T	R	Y	P	D	I	L	F
Template Known Secondary structure																					T	T	S
Template Predicted Secondary structure
Template SS confidence
		504	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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