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Job DescriptionP13656
Confidence99.53%DateThu Jan 5 11:33:39 GMT 2012
Rank21Aligned Residues255
% Identity18%Templatec1wnoB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:chitinase; PDBTitle: crystal structure of a native chitinase from aspergillus fumigatus yj-2 407
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   582.......590.........600.........610.........620 .........630. ........640......
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Query Sequence  KAWPKHVYAPYVDFTLNTIPDLAALAKNHNVNHFTLAFV. VSKDANTCLPT. . . . . . . . . . . . . . WGTAYGMQNYAQYSK
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Template Sequence  ASSGYRSVVYFVNWAIYGRNHNPQDLPVERLTHVLYAFANVRPETGEVYMTDSWADIEKHYPGDSWSDTGNNVYGCIK. Q
Template Known Secondary structure 
B

BGGGGSTT


GGGS
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S
TTT

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   1........10.........20.........30.........40.........50.........60.........70........ .
 
   647..650... ......660........ .670.........680.........690.........700...... ...710......
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Query Sequence  IKALREA. . GGDVMLSIGGANNAP. . . . LAASCKNVDDLMQHYYDIVDNLNLKVLDFDIEGTWVAD. . . . QASIERRNLA
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Template Sequence  LYLLKKQNRNLKVLLSIGGWTYSPNFAPAASTDAGRKNFAKTAVKLLQDLGFDGLDIDWEYPENDQQANDFVLLLREVRT
Template Known Secondary structure 
TT

TTTGGGTTST
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S
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   80.........90.........100.........110.........120.........130.........140.........150.........
 
   717..720.........730.........740.........750.........760.........770..... ....780.....
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Query Sequence  VKKVQDKWKSEGKDIAIWYTLPILPTGLTPEGMNVLSDAKAKGVELAGVNVMTMDYGNA. . . . . . . . . . . ICQSANTEGQ
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Template Sequence  ALDSYSAANAGGQHFLLTVASPA. . . . . . GPDKIKVLHLKDMDQQLDFWNLMAYDYAGSFSSLSGHQANVYNDTSNPLST
Template Known Secondary structure  STT




......SS
TT
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SSSTTSSS


SS
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TTSGGG
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   160.........170.........180.. .......190.........200.........210.........220.........230...
 
   786...790.........800.........810.........820... ....
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Query Sequence  NIHGKCATSAIANLHSQLKGLHPNKSDAEIDAMMGTTP. . . MVGV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PFNTQTALD. . . . . . . . . . . . . . . . . . . . LYRAGGVPANKIVLGMPLYGRSFANTDGPGKPYNGVGQGSWENGVWDYKAL
Template Known Secondary structure  S

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GGGSS
SSTTS







SSBTTGGG
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   234.....240.. .......250.........260.........270.........280.........290...
 
   828.830.........840.... .....850.........860...
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Query Sequence  . . . . . . . . . . . . . . . . . . . NDVQGEVFYLSDARLVM. . . QDAQKRNLGMVGIWSIARD
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Template Sequence  PQAGATEHVLPDIMASYSYDATNKFLISYDNPQVANLKSGYIKSLGLGGAMWWDSSSD
Template Known Secondary structure  S
TT
GGGTTTTT


T


GGG
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   294.....300.........310.........320.........330.........340.........350.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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