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Job DescriptionP13656
Confidence99.66%DateThu Jan 5 11:33:39 GMT 2012
Rank14Aligned Residues355
% Identity14%Templatec1rd6A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:chitinase a; PDBTitle: crystal structure of s. marcescens chitinase a mutant w167a
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   504.....510. ........520.........530.........540.........550.........560.........570.........580.
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Query Sequence  NSRPWKPL. GKAQSYSNEELNNAPQFNPETLYASDTLIRFNGVNYISQSKVQKVSPSDSNPWRVFVDWTGTKERVGTPK.
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Template Sequence  SWNLWNGDAGTTAKILLNGKEAWSGPSTGSSGTANFKVNKGGRYQMQVALCNADGCTASDATEIVVADTDGSHLPPLKES
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SSS


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   65....70.........80.........90.........100.........110.........120.........130.........140....
 
   582.......590...... ...600.........610.........620.........630
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Query Sequence  . . . . . . . . KAWPKHVYAPYVDFT. LNTIPDLAALAKNHNVNHFTLAFVVSKDANTCLP. . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LLEKNKPYKQNSGKVVGSYFVEAGVYGRNFTVDKIPAQNLTHLLYGFIPICGGNGINDSLKEIEGSFQALQRSCQGREDF
Template Known Secondary structure 

TT


B


S
S
GGGGSTT


GGGS
GGG
S
B


TTTSGGGGGSTTTTT

TT
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   145....150.........160.........170.........180.........190.........200.........210.........220....
 
   631........640 .........650... ......660....... ..670.........680.........690
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Query Sequence  . . . . . . . . . . . . . TWGTAYGMQN. . YAQYSKIKALREA. . GGDVMLSIGGANNA. . . PLAASCKNVDDLMQHYYDIVDNL
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Template Sequence  KISIHDPFAALQKAQKGVTAWDDPYKGNFGQLMALKQAHPDLKILPSIGGWTLSDPFFFMGDKVKRDRFVGSVKEFLQTW
Template Known Secondary structure 
B

S
TS
BTTB

TT
SS

TT

TTT
GGGGGTTS
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   225....230.........240.........250.........260.........270.........280.........290.........300....
 
   691. .......700 .........710....... ..720.........730.........740.........750........
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Query Sequence  NL. KVLDFDIE. . . . . . . . . . GTWVADQASIERRNLAV. KKVQDKWKSEGKDIAIWYTLPILPTGLTPEGMNVLSDAKAK
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Template Sequence  KFFDGVDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSAETGRKYELTSAISAGKDKIDKVAYNVAQN. . . .
Template Known Secondary structure  TT


S
TTS
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TT


TT





TTS
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   305....310.........320.........330.........340.........350.........360.........370.........380
 
   759760.........770...... ...780.........790.........800..
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Query Sequence  GVELAGVNVMTMDYGNAI. . . . . . . . CQSANTEGQNIHGKCATSAIANLHSQ. . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . SMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNGVNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNI
Template Known Secondary structure  ..T
S


SS
TT
SSS


SS
SS

TT
TT
S

T

GGGSS
BS

TT
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   381........390.........400.........410.........420.........430.........440.........450........
 
   803......810.........820.........830.........840..... ....850......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . LKGLHPNKSDAEIDAMMGTTPMVGVNDVQGEVFYLSDARLVMQ. . . DAQKRNLGMVG
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Template Sequence  PFTGTATGPVKGTWENGIVDYRQIASQFMSGEWQYTYDATAEAPYV. FKPSTGDLITFDDARSVQAKGKYVLDKQLGGLF
Template Known Secondary structure  GGGSB
S


SSBTTSSSTT
TTTT.TTTT


T

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   459460.........470.........480.........490.........500.... .....510.........520.........530.......
 
   857..860.....
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Query Sequence  IWSIARDLP
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Template Sequence  SWEIDADNG
Template Known Secondary structure 
GGG

S
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   538.540......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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