Job Description P13656 Confidence 99.46% Date Thu Jan 5 11:33:39 GMT 2012 Rank 28 Aligned Residues 260 % Identity 20% Template c1ll4A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:chitinase 1; PDBTitle: structure of c. immitis chitinase 1 complexed with2 allosamidin Resolution 2.80 Å

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		592	.	.	.	.		.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.															.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.
Predicted Secondary structure							.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence							.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		Y	V	D	F	T	.	L	N	T	I	P	D	L	A	A	L	A	K	N	H	N	V	N	H	F	T	L	A	F	V	V	S	K	D	A	N	T	C	L	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	G	T	A	Y	G	M	Q	N	Y	A	Q	Y	S	K	I	K	A	L	R	E	A	G	G	.
Query Conservation							.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Alig confidence							.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.										.															.
Template Conservation																																																																		.
Template Sequence		Y	F	V	N	W	A	I	Y	G	R	G	H	N	P	Q	D	L	K	A	D	Q	F	T	H	I	L	Y	A	F	A	N	I	R	P	S	G	E	V	Y	L	S	D	T	W	A	D	T	D	K	H	Y	P	G	D	K	W	D	E	P	G	N	N	V	Y	.	G	C	I	K	Q	M	Y	L	L	K	K	N	N	R	N
Template Known Secondary structure					G	G	G	G	T	T	T				G	G	G	S		G	G	G		S											T	T	S					S							T				T	T			S	S		S	S	S				.														T	T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
			656	.	.	.	660	.	.	.	.	.	.	.	.					.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.		.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.
Predicted Secondary structure		.														.	.	.	.																																							.																						.	.
Query SS confidence		.														.	.	.	.																																							.																						.	.
Query Sequence		.	D	V	M	L	S	I	G	G	A	N	N	A	P	.	.	.	.	L	A	A	S	C	K	N	V	D	D	L	M	Q	H	Y	Y	D	I	V	D	N	L	N	L	K	V	L	D	F	D	I	E	G	T	W	V	A	D	.	Q	A	S	I	E	R	R	N	L	A	V	K	K	V	Q	D	K	W	K	S	E	.	.
Query Conservation		.														.	.	.	.																																							.																						.	.
Alig confidence		.														.	.	.	.																																							.																						.	.
Template Conservation
Template Sequence		L	K	T	L	L	S	I	G	G	W	T	Y	S	P	N	F	K	T	P	A	S	T	E	E	G	R	K	K	F	A	D	T	S	L	K	L	M	K	D	L	G	F	D	G	I	D	I	D	W	E	Y	P	E	D	E	K	Q	A	N	D	F	V	L	L	L	K	A	C	R	E	A	L	D	A	Y	S	A	K	H	P
Template Known Secondary structure											T	T	T	G	G	G	T					T	S																			T		S							S				S																								T		T
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
			728	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.									.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																														.	.	.	.	.	.	.	.
Query SS confidence		.																																														.	.	.	.	.	.	.	.
Query Sequence		.	G	K	D	I	A	I	W	Y	T	L	P	I	L	P	T	G	L	T	P	E	G	M	N	V	L	S	D	A	K	A	K	G	V	E	L	A	G	V	N	V	M	T	M	D	Y	.	.	.	.	.	.	.	.	G	N	A	I	C	Q	S	A	N	T	E	G	Q	N	I	H	G	K	C	A	T	S	A	I	A	N
Query Conservation		.																																														.	.	.	.	.	.	.	.
Alig confidence		.																												.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.
Template Sequence		N	G	K	K	F	L	L	T	I	A	S	P	A	G	P	Q	N	Y	N	K	L	K	L	A	E	M	D	K	.	.	.	.	.	.	Y	L	D	F	W	N	L	M	A	Y	D	F	S	G	S	W	D	K	V	S	G	H	M	S	N	V	F	P	S	T	T	K	P	E	S	T	P	F	S	S	D	K	A	V	K	D
Template Known Secondary structure		T	S												S					T	T	S							T	.	.	.	.	.	.	T		S									S	S	S	T	T		S	B				S	S		S	S			S	S		G	G	G		S
Template Predicted Secondary structure																														.	.	.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.							230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		799	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.																																																		.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	H	S	Q	L	K	G	L	H	P	N	K	S	D	A	E	I	D	A	M	M	G	T	T	P	M	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	D
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.
Template Sequence		Y	I	K	A	G	V	P	A	N	.	.	.	.	.	.	.	.	.	K	I	V	L	G	M	P	L	Y	G	R	A	F	A	S	T	D	G	I	G	T	S	F	N	G	V	G	G	G	S	W	E	N	G	V	W	D	Y	K	D	M	P	Q	Q	G	A	Q	V	T	E	L	E	D	I	A	A	S	Y	S	Y	D	K
Template Known Secondary structure						T			G	G	.	.	.	.	.	.	.	.	.	G							S						S	S		S	S	T	T	S	B		S						S	S	B	T	T				G	G	G		S		T	T							G	G	G	T							T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.										.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		830	.	.	.	.	.	.	.	.	.	840	.	.	.	.				.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		V	Q	G	E	V	F	Y	L	S	D	A	R	L	V	M	.	.	.	Q	D	A	Q	K	R	N	L	G	M	V	G	I	W	S	I	A	R	D	L	P	G	G
Query Conservation																	.	.	.
Alig confidence																	.	.	.
Template Conservation
Template Sequence		N	K	R	Y	L	I	S	Y	D	T	V	K	I	A	G	K	K	A	E	Y	I	T	K	N	G	M	G	G	G	M	W	W	E	S	S	S	D	K	T	G	N
Template Known Secondary structure		T	T	T																					T	T									T	T	S				G	G
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions