Job Description P13656 Confidence 99.43% Date Thu Jan 5 11:33:39 GMT 2012 Rank 31 Aligned Residues 274 % Identity 19% Template c1kfwA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:chitinase b; PDBTitle: structure of catalytic domain of psychrophilic chitinase b from2 arthrobacter tad20 Resolution 1.74 Å

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		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.						.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.										.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.
Predicted Secondary structure																							.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Query Sequence		G	T	P	K	K	A	W	P	K	H	V	Y	A	P	Y	V	D	F	T	L	N	.	.	.	.	.	T	I	P	D	L	A	A	L	A	K	N	H	N	V	N	H	F	T	L	A	F	V	V	S	K	D	A	N	.	.	.	.	.	.	.	.	.	T	C	L	P	T	W	G	T	A	Y	G	M	Q	N	Y	A	Q
Query Conservation																							.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Alig confidence															.								.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation															.
Template Sequence		P	L	T	S	T	V	N	G	Y	R	N	V	G	.	Y	F	A	Q	W	G	V	Y	G	R	A	F	Q	A	K	Q	L	D	V	S	G	T	A	K	N	L	T	H	I	N	Y	S	F	G	N	I	N	N	Q	T	L	T	C	F	M	A	N	K	A	Q	G	T	G	P	N	G	S	D	G	A	G	D	A	W	A	D
Template Known Secondary structure				B	S	S	B	T	T	B					.				G	G	G	G	S	T	T										T	S		G	G	G		S									B		T	T	T		S	B									S	S	T	T	T	T	T	T
Template Predicted Secondary structure															.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
																											644	.	.	.	.	.	650	.	.	.			.	.	.	.	.	.	660	.	.	.	.	.	.	.					.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.															.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.															.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	K	I	K	A	L	R	E	A	.	.	G	G	D	V	M	L	S	I	G	G	A	N	N	A	.	.	.	.	P	L	A	A	S	C	K	N	V	D	D	L	M	Q	H	Y	Y	D	I	V	D	N	L	N	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.															.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.															.	.	.	.
Template Conservation
Template Sequence		F	G	M	G	Y	A	A	D	K	S	V	S	G	K	A	D	T	W	D	Q	P	L	A	G	S	F	N	Q	L	K	Q	L	K	A	K	N	P	K	L	K	V	M	I	S	L	G	G	W	T	W	S	K	N	F	S	K	A	A	A	T	E	A	S	R	Q	K	L	V	S	S	C	I	D	L	Y	I	K	G	N	L
Template Known Secondary structure			T					T	T	T	S	S	S	S	S				T	T		S													T	T		T	T										S	S	S		T	T					T	S	S																T	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
																		693	.	.	.	.	.	.	700													.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.		.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	L	D	F	D	I	E	.	.	.	.	.	.	.	.	.	.	.	.	G	T	W	V	A	D	Q	A	S	I	E	R	R	N	L	A	V	.	K	K	V	Q	D	K	W	K	S	E	G	K	D	I	A	I	W	Y	T	L	P	I	L	P	T	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		P	N	F	E	G	R	G	G	A	G	A	A	A	G	I	F	D	G	I	D	I	D	W	E	W	P	G	T	N	S	G	L	A	G	N	G	V	D	T	V	N	D	R	A	N	F	K	A	L	L	A	E	F	R	K	Q	L	D	A	Y	G	S	T	N	N	K	K	Y	V	L	S	A	F	L	P	A	N	P	A	D
Template Known Secondary structure					T	T				T	T	T	T	T	T	T									S		T	T	S	S		S	S	T	T					T	T	T																							T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		744	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.									780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.
Query Sequence		L	T	P	E	G	M	N	V	L	S	D	A	K	A	K	G	V	E	L	A	G	V	N	V	M	T	M	D	Y	G	N	A	I	C	Q	S	.	.	.	.	.	.	.	.	A	N	T	E	G	Q	N	I	H	G	K	C	A	T	S	A	I	A	N	L	H	S	Q	L	K	G	L	H	P	N	K	S	D	A	E	I
Query Conservation																																						.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.																									.	.	.	.	.	.	.	.																																	.	.	.	.
Template Conservation										.	.	.	.																																																																	.	.	.	.
Template Sequence		I	D	A	G	G	W	D	D	.	.	.	.	P	A	N	F	K	S	L	D	F	G	S	I	Q	G	Y	D	L	H	G	A	W	N	P	T	L	T	G	H	Q	A	N	L	Y	D	D	P	A	D	P	R	A	P	S	K	K	F	S	A	D	K	A	V	K	K	Y	L	A	A	G	I	D	P	K	Q	.	.	.	.
Template Known Secondary structure						T	T	T		.	.	.	.	G	G	G	G	G	T		S							S		S	S		T	T	S	T	T	B				S	S		S	S			T	T			S		G	G	G														T	T			G	G	G	.	.	.	.
Template Predicted Secondary structure										.	.	.	.																																																																	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.					.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		816	.	.	.	820	.	.	.	.	.	.	.	.																																																		.	830	.	.	.	.	.	.	.	.	.	840	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		D	A	M	M	G	T	T	P	M	V	G	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	Q	G	E	V	F	Y	L	S	D	A	R	L	V	.	.	.
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.														.	.	.
Template Conservation		.	.																																																														.
Template Sequence		.	.	L	G	L	G	L	A	A	Y	G	R	G	W	T	G	A	K	N	V	S	P	W	G	P	A	T	D	G	A	P	G	T	Y	E	T	A	N	E	D	Y	D	K	L	K	T	L	G	T	D	H	Y	D	A	A	T	G	S	A	W	R	Y	D	.	G	T	Q	W	W	S	Y	D	N	I	A	T	T	K	Q	K
Template Known Secondary structure		.	.							S							S				S	S	S	S		B		S						S	S	B	T	T								T	T	S	S						T	T	T	T							.	S	S
Template Predicted Secondary structure		.	.																																																														.
Template SS confidence
				321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		844	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	D	A	Q	K	R	N	L	G	M	V	G	I	W	S	I	A	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	D	Y	I	V	S	K	G	L	G	G	G	M	W	W	E	L	S	G	D
Template Known Secondary structure								T	T									G	G	G
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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