Job Description P13656 Confidence 99.43% Date Thu Jan 5 11:33:39 GMT 2012 Rank 33 Aligned Residues 245 % Identity 15% Template c1hjvA_ PDB info PDB header:lectin Chain: A: PDB Molecule:chitinase-3 like protein 1; PDBTitle: crystal structure of hcgp-39 in complex with chitin2 tetramer Resolution 2.75 Å

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		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.			.	.	.	.	660	.	.	.	.	.	.						.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.
Predicted Secondary structure																																																.	.												.	.	.	.	.
Query SS confidence																																																.	.												.	.	.	.	.
Query Sequence		H	N	V	N	H	F	T	L	A	F	V	V	S	K	D	A	N	T	C	L	P	T	W	G	T	A	Y	G	M	Q	N	Y	A	Q	Y	S	K	I	K	A	L	R	E	A	G	G	.	.	D	V	M	L	S	I	G	G	A	N	N	.	.	.	.	.	A	P	L	A	A	S	C	K	N	V	D	D	L	M	Q	H
Query Conservation																																																.	.												.	.	.	.	.
Alig confidence																			.	.							.	.	.	.																		.	.												.	.	.	.	.
Template Conservation																			.	.							.	.	.	.
Template Sequence		F	L	C	T	H	I	I	Y	S	F	A	N	I	S	N	D	H	.	.	I	D	T	W	E	W	.	.	.	.	N	D	V	T	L	Y	G	M	L	N	T	L	K	N	R	N	P	N	L	K	T	L	L	S	V	G	G	W	N	F	G	S	Q	R	F	S	K	I	A	S	N	T	Q	S	R	R	T	F	I	K	S
Template Known Secondary structure		T	T		S											S	S	S	.	.					S	T	.	.	.	.	T											T	T	T	T		T	T										G	G	G
Template Predicted Secondary structure																			.	.							.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		683	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.		.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		Y	Y	D	I	V	D	N	L	N	L	K	V	L	D	F	D	I	E	G	T	W	V	A	D	Q	A	S	I	E	R	R	N	L	A	V	.	K	K	V	Q	D	K	W	K	S	E	G	K	D	I	A	I	W	Y	T	L	P	I	L	P	T	G	L	T	P	E	G	M	N	V	L	S	D	A	K	A	K	G	V	E
Query Conservation																																					.
Alig confidence																																					.																							.	.	.	.	.
Template Conservation																																																												.	.	.	.	.
Template Sequence		V	P	P	F	L	R	T	H	G	F	D	G	L	D	L	A	W	L	Y	P	G	R	R	D	K	Q	H	F	T	T	L	I	K	E	M	K	A	E	F	I	K	E	A	Q	P	G	K	K	Q	L	L	L	S	A	A	L	S	A	.	.	.	.	.	G	K	V	T	I	D	S	S	Y	D	I	A	K	I	S	Q	H
Template Known Secondary structure										T		S							S				G	G	G	T	T																		T	T	T													.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		762	.	.	.	.	.	.	.	770	.	.	.	.	.													.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	G	V	N	V	M	T	M	D	Y	G	N	A	.	.	.	.	.	.	.	.	.	.	.	.	I	C	Q	S	A	N	T	E	G	Q	N	I	H	G	K	C	A	T	S	A	I	A	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	F	I	S	I	M	T	Y	D	F	H	G	A	W	R	G	T	T	G	H	H	S	P	L	F	R	G	Q	E	D	A	S	P	D	R	F	S	N	T	D	Y	A	V	G	Y	M	L	R	L	G	A	P	A	S	K	L	V	M	G	I	P	T	F	G	R	S	F	T	L	A	S	S	E	T	G	V	G	A	P
Template Known Secondary structure			S												G	G	G	S	B				S	S		S	S			S	T	T	T	S	S		S	S		S												T			G	G	G							S								S	S	S			S	T	T		B
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
																				800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	Q	L	K	G	L	H	P	N	K	S	D	A	E	I	D	A	M	M	G	T	T	P	M	V	G	V	N	D	V	Q	G	E	V	F	Y	L	S	D	A	R	L	V	M	Q	D	A	Q	K	R	N	L	G	M	V	G	I	W	S	I	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																																		.	.
Template Sequence		I	S	G	P	G	I	P	G	R	F	T	K	E	A	G	T	L	A	Y	Y	E	I	C	D	F	L	R	G	A	T	V	H	.	.	R	I	L	G	Q	Q	V	P	Y	A	T	K	G	N	Q	W	V	G	Y	D	D	Q	E	S	V	K	S	K	V	Q	Y	L	K	D	R	Q	L	A	G	A	M	V	W	A	L	D
Template Known Secondary structure										T	T	T			T	T											T	T	T					.	.			T	T	T	T							T	T																					T	T		S							G	G
Template Predicted Secondary structure																																		.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.			310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		862	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	L	P	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	D	F	Q	G
Template Known Secondary structure		G	S			S	S
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions