Job Description P0A9S1 Confidence 100.00% Date Wed Jan 25 15:20:20 GMT 2012 Rank 18 Aligned Residues 325 % Identity 14% Template d1sg6a_ SCOP info Dehydroquinate synthase-like Dehydroquinate synthase-like Dehydroquinate synthase, DHQS Resolution 1.70

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		8	.	10									.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.									.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.											.	.																																							.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.											.	.																																							.	.	.	.	.	.	.	.
Query Sequence		N	E	T	.	.	.	.	.	.	.	.	A	W	F	G	R	G	A	V	G	A	.	.	L	T	D	E	V	K	R	R	G	Y	Q	K	A	L	I	V	T	D	K	T	L	V	Q	C	G	V	V	A	K	V	T	D	K	M	D	A	A	G	.	.	.	.	.	.	.	.	L	A	W	A	I	Y	D	G	V	V	P
Query Conservation					.	.	.	.	.	.	.	.											.	.																																							.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.											.	.																									.														.	.	.	.	.	.	.	.
Template Conservation																																																	.
Template Sequence		P	T	K	I	S	I	L	G	R	E	S	I	I	A	D	F	G	L	W	R	N	Y	V	A	K	D	L	I	S	D	C	S	S	T	T	Y	V	L	V	T	D	T	N	I	G	S	I	.	Y	T	P	S	F	E	E	A	F	R	K	R	A	A	E	I	T	P	S	P	R	L	L	I	Y	N	R	P	P	G	E	V
Template Known Secondary structure								T	T								T	T					T									S			S														.																S	S	S											S	S	G	G
Template Predicted Secondary structure																																																	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.						.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		N	P	T	I	T	V	V	K	E	G	L	G	V	F	Q	N	S	G	A	.	.	.	.	.	D	Y	L	I	A	I	G	G	G	S	P	Q	D	T	C	K	A	I	G	I	I	S	N	N	P	E	F	A	D	V	R	S	L	E	G	L	S	P	T	N	K	P	S	V	P	I	L	A	I	P	T	T	A	G	T	A
Query Conservation																					.	.	.	.	.
Alig confidence																					.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	K	S	R	Q	T	K	A	D	I	E	D	W	M	L	S	Q	N	P	P	C	G	R	D	T	V	V	I	A	L	G	G	G	V	I	G	D	L	T	G	F	V	A	S	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	R	G	V	R	Y	V	Q	V	P	T	T	L	L	A	M
Template Known Secondary structure		G	S	S													T	S	S	S				T	T								S														G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G										S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.																			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	V	T	I	N	Y	V	I	T	D	E	E	K	R	R	K	F	V	C	V	D	P	H	D	I	P	Q	V	A	F	I	D	A	D	M	M	D	G	M	P	P	A	L	K	A	A	T	G	V	D	A	L	T	H	A	I	E	G	Y	I	T	R	G	A	W	A	L	T	D	A	L	H	I	K	A	I	E	I	I
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		V	D	S	S	I	G	G	K	T	A	I	D	T	P	L	G	K	N	L	I	G	A	I	W	.	Q	P	T	K	I	Y	I	D	L	E	F	L	E	T	L	P	V	R	E	F	I	N	G	M	A	E	V	I	K	T	A	A	I	S	S	E	E	E	F	T	A	L	E	E	N	A	E	T	I	L	K	A	V	R	R
Template Known Secondary structure			T	T	T	S	S								T	T										.			S						G	G	G	G	G	T	S																		T	T
Template Predicted Secondary structure																										.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		225	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.				.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.							.	.	.	.	.	.	.	290	.
Predicted Secondary structure												.	.																						.	.	.																	.	.												.	.	.	.	.	.
Query SS confidence												.	.																						.	.	.																	.	.												.	.	.	.	.	.
Query Sequence		A	G	A	L	R	G	S	V	A	G	.	.	D	K	D	A	G	E	E	M	A	L	G	Q	Y	V	A	G	M	G	F	S	N	.	.	.	V	G	L	G	L	V	H	G	M	A	H	P	L	G	A	F	.	.	Y	N	T	P	H	G	V	A	N	A	I	.	.	.	.	.	.	L	L	P	H	V	M	R	Y	N
Query Conservation												.	.																						.	.	.																	.	.												.	.	.	.	.	.
Alig confidence												.	.																						.	.	.																	.	.												.	.	.	.	.	.
Template Conservation
Template Sequence		E	V	T	P	G	E	H	R	F	E	G	T	E	E	I	L	K	A	R	I	L	A	S	A	R	H	K	A	Y	V	V	S	A	G	L	R	N	L	L	N	W	G	H	S	I	G	H	A	I	E	A	I	L	T	P	Q	I	L	H	G	E	C	V	A	I	G	M	V	K	E	A	E	L	A	R	H	L	G	I	L
Template Known Secondary structure					T	T	S		T	T	G	G	G																							G	G	G	G	G	G	T	T												T	T	T	S																				T	T		S
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.						.	.	.	.	.	.	.	.	330										.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																																.	.	.	.	.										.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.										.	.	.	.	.	.	.	.	.
Query Sequence		A	D	F	T	G	E	K	Y	R	D	I	A	R	V	M	G	V	K	V	E	G	M	S	L	E	E	A	R	N	A	.	.	.	.	.	A	V	E	A	V	F	A	L	N	.	.	.	.	.	.	.	.	.	R	D	V	G	I	P	P	H	L	R	D	V	G	V	R	K	E	D	I	P	A	L
Query Conservation																																.	.	.	.	.										.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	V	A	V	S	R	I	V	K	C	L	A	A	Y	G	L	P	T	S	L	K	D	A	R	I	R	K	L	T	A	G	K	H	C	S	V	D	Q	L	M	F	N	M	A	L	D	K	K	I	V	L	L	S	A	I	G	T	P	Y	E	T	R	A	S	V	V	A	N	E	D	I	R	V	V
Template Known Secondary structure																T	T				S	T	T								T	T	T														T										T	T			S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions