Job Description P0A9S1 Confidence 75.50% Date Wed Jan 25 15:20:20 GMT 2012 Rank 135 Aligned Residues 87 % Identity 9% Template c3sajB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:glutamate receptor 1; PDBTitle: crystal structure of glutamate receptor glua1 amino terminal domain Resolution 2.50 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	F	G	R	G	A	V	G	A	L	T	D	E	V	K	R	R	G	Y	Q	K	A	L	I	V	T	D	K	T	L	V	Q	C	G	V	V	A	K	V	T	D	K	M	D	A	A	G	L	A	W	A	I	Y	D	G	V	V	P	N	P	T	I	T	V	V	K	E	G	L	G	V	F	Q	N	S	G	A	D	Y
Query Conservation
Alig confidence																																				.																				.	.
Template Conservation																																				.																				.	.
Template Sequence		L	Q	L	R	P	E	L	Q	E	A	L	I	S	I	I	D	H	Y	K	W	Q	T	F	V	Y	I	Y	D	A	D	R	G	L	S	.	V	L	Q	R	V	L	D	T	A	A	E	K	N	W	Q	V	T	A	V	.	.	N	I	L	T	T	T	E	E	G	Y	R	M	L	F	Q	D	L	E	K	K	K	E	R	L
Template Known Secondary structure					S															T														T	T	.													T							.	.		T	T	T																S	S	S
Template Predicted Secondary structure																																				.																				.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		91	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	A	I	G	G	G	S	P	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	V	D	C	E	S	E	R	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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