Job Description P0A9S1 Confidence 53.69% Date Wed Jan 25 15:20:20 GMT 2012 Rank 197 Aligned Residues 75 % Identity 21% Template c3nhzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra Resolution 2.50 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		Y	Q	K	A	L	I	V	T	D	K	T	L	V	Q	C	G	V	V	A	K	V	T	D	K	M	D	A	A	G	L	A	W	A	I	Y	D	G	V	V	P	N	P	T	I	T	V	V	K	E	G	L	G	V	F	Q	N	S	G	A	D	Y	L	I	A	.	.	.	I	G	G	G	S	P	Q	D	T	C	K	A	I
Query Conservation																																																																		.	.	.
Alig confidence														.	.	.	.																									.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation														.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Sequence		R	Q	R	I	L	V	V	D	D	D	A	S	.	.	.	.	L	A	E	M	L	T	I	V	L	R	G	E	G	F	D	T	A	V	I	G	D	G	T	Q	.	.	.	.	.	.	.	.	.	A	L	T	A	V	R	E	L	R	P	D	L	V	L	L	D	L	M	L	P	G	M	N	G	I	D	V	C	R	V	L
Template Known Secondary structure										S				.	.	.	.												T	T									G	G	G	.	.	.	.	.	.	.	.	.											S						S	S		S	S	S
Template Predicted Secondary structure														.	.	.	.																									.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40										.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	I	S	N	N	P	E	F	A	D	V	R	S	L	E	G	L	S	P	T	N	K	P	S	V	P	I	L	A	I
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	S	G	V	P	I	V	M	L
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		72																					.	.	.	.	.	.	.	80	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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