Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9S1
Confidence79.83%DateWed Jan 25 15:20:20 GMT 2012
Rank110Aligned Residues109
% Identity20%Templatec3dnfB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PDBTitle: structure of (e)-4-hydroxy-3-methyl-but-2-enyl diphosphate reductase,2 the terminal enzyme of the non-mevalonate pathway
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.........100.........
Predicted Secondary structure 






















.
Query SS confidence 














































































.
Query Sequence  QKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAIGII.
Query Conservation     



            
   
   

       
   
    
            
 







 

 

 

  .
Alig confidence 













.






















.















..





















.
Template Conservation   

 

 


    .    
   
        
  


. 

  

 

  

  ..

 





 




 

 


 
Template Sequence  ERVGIVAQTTQNEE. FFKEVVGEIALWVKEVKVINTIC. NATSLRQESVKKLAPE. . VDVMIIIGGKNSGNTRRLYYISK
Template Known Secondary structure  S
TT

.SS




.TGGG..SSS
TT
Template Predicted Secondary structure 





.








.
..








Template SS confidence 















































































   157..160.........170 .........180.........190... ......200......... 210.........220.........230..
 
   110.........120.........130.........140...
Predicted Secondary structure 






















Query SS confidence 

































Query Sequence  SNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGT
Query Conservation                        

 
 






Alig confidence 

































Template Conservation       
  

   

    
     








Template Sequence  ELNPNTYHIETAEELQPEWFRGVKRVGISAGAST
Template Known Secondary structure 
TTSSGGG

GGGGTT
S
TT
Template Predicted Secondary structure 
















Template SS confidence 

































   233......240.........250.........260......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions