Job Description P0A9S1 Confidence 26.61% Date Wed Jan 25 15:20:20 GMT 2012 Rank 377 Aligned Residues 90 % Identity 12% Template c3clkB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcription regulator; PDBTitle: crystal structure of a transcription regulator from lactobacillus2 plantarum Resolution 2.08 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.
Predicted Secondary structure																									.	.																																															.
Query SS confidence																									.	.																																															.
Query Sequence		A	V	G	A	L	T	D	E	V	K	R	R	G	Y	Q	K	A	L	I	V	T	D	K	.	.	T	L	V	Q	C	G	V	V	A	K	V	T	D	K	M	D	A	A	G	L	A	W	A	I	Y	D	G	V	V	P	N	P	T	I	T	V	V	K	E	G	L	G	V	F	Q	N	.	S	G	A	D	Y	L	I	A
Query Conservation																									.	.																																															.
Alig confidence																									.	.																																															.
Template Conservation
Template Sequence		I	G	Y	Q	A	T	N	L	L	I	N	E	G	H	R	Q	I	G	I	A	G	I	D	Q	Y	P	Y	T	G	R	K	R	L	A	G	Y	K	K	A	L	K	E	A	N	I	A	I	N	Q	E	W	I	K	P	G	D	Y	S	Y	T	S	G	E	Q	A	X	K	A	F	G	K	N	T	D	L	T	G	I	I	A
Template Known Secondary structure												T	T	T			S					S				S	S																	T	T					G	G	G						S	S													T	T				S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	G	G	S	P	Q	D	T	C	K	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	D	X	T	A	I	G	I	L	N	Q	A
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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