Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9S1
Confidence35.09%DateWed Jan 25 15:20:20 GMT 2012
Rank294Aligned Residues56
% Identity13%Templatec3afoB_
PDB info PDB header:transferaseChain: B: PDB Molecule:nadh kinase pos5; PDBTitle: crystal structure of yeast nadh kinase complexed with nadh
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.... .....50.........60.........70.........80......
Predicted Secondary structure 



.












.......................
Query SS confidence 













.









































. . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  QKALIVTDKTLVQC. GVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNS. . . . . . . . . . . . . . . . . . . . . . .
Query Conservation     



       .     
   
   

       
   
    
          .......................
Alig confidence 













.





















..........









.......................
Template Conservation 
 



 
  
        

   
        
 

..........   
                             
Template Sequence  QNVYITKKPWTPSTREAMVEFITHLHESYPEVNVIVQ. . . . . . . . . . PDVAEEISQDFKSPLENDPNRPHILYTGPEQDI
Template Known Secondary structure 

TT

TT


..........GGG

S
GGG
TTS



Template Predicted Secondary structure 







..........



















Template SS confidence 















































































   68.70.........80.........90.........100.... .....110.........120.........130.......
 
   87..90......
Predicted Secondary structure  ..




Query SS confidence  . .









Query Sequence  . . GADYLIAIGG
Query Conservation  ..  
 





Alig confidence  ..









Template Conservation      



 


Template Sequence  VNRTDLLVTLGG
Template Known Secondary structure 
SS
Template Predicted Secondary structure 




Template SS confidence 











   138.140.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions