Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9S1
Confidence21.29%DateWed Jan 25 15:20:20 GMT 2012
Rank487Aligned Residues107
% Identity19%Templatec2rkbE_
PDB info PDB header:lyaseChain: E: PDB Molecule:serine dehydratase-like; PDBTitle: serine dehydratase like-1 from human cancer cells
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70... ......80.
Predicted Secondary structure 
























.....
Query SS confidence 


































































. . . . .







Query Sequence  LNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTI. . . . . TVVKEGLG
Query Conservation   
  
  
 
 
  
   
   
    



            
   
   

       
   
  .....  
     
Alig confidence 
























..









..













...










.....







Template Conservation 
   

 
          
   

 ..
  
      ..        
     ...       
     
  

  

  
Template Sequence  IPATIVLPESTSLQVVQRLQGEGAE. . VQLTGKVWDE. . ANLRAQELAKRDGW. . . ENVPPFDHPLIWKGHASLVQELKA
Template Known Secondary structure 


TT

TT
..

SS..STT...

SS
S
Template Predicted Secondary structure 









..


..


...





Template SS confidence 















































































   88.90.........100.........110.. .......120.. .......130...... ...140.........150.........160
 
   82.......90.........100.........110.........120.........130.......
Predicted Secondary structure 
























Query SS confidence 























































Query Sequence  VFQNSGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAI
Query Conservation         
 







 

 

 

                        

 
 
Alig confidence 
































.................





Template Conservation 

      

   
 

   
            .................  

 
Template Sequence  VLRTPPGALVLAVGGGGLLAGVVAGLLEVGWQH. . . . . . . . . . . . . . . . . VPIIAM
Template Known Secondary structure  SSS

S
SSST
TT.................S
Template Predicted Secondary structure 













.................
Template SS confidence 























































   161........170.........180.........190... ......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions