Job Description P0A9S1 Confidence 36.01% Date Wed Jan 25 15:20:20 GMT 2012 Rank 285 Aligned Residues 78 % Identity 24% Template c2qzjC_ PDB info PDB header:transcription Chain: C: PDB Molecule:two-component response regulator; PDBTitle: crystal structure of a two-component response regulator from2 clostridium difficile Resolution 2.89 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		Y	Q	K	A	L	I	V	T	D	K	T	L	V	Q	C	G	V	V	A	K	V	T	D	K	M	D	A	A	G	L	A	W	A	I	Y	D	G	V	V	P	N	P	T	I	T	V	V	K	E	G	L	G	V	F	Q	N	S	G	A	D	Y	L	.	.	.	I	A	I	G	G	G	S	P	Q	D	T	C	K	A	I
Query Conservation																																																																.	.	.
Alig confidence														.	.	.	.																								.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation														.	.	.	.																								.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	K	I	L	I	I	D	G	D	K	D	.	.	.	.	N	C	Q	K	L	K	G	F	L	E	E	K	G	I	S	I	D	L	A	Y	N	C	E	.	.	.	.	.	.	.	.	.	E	A	I	G	K	I	F	S	N	K	Y	D	L	I	F	L	E	I	I	L	S	D	G	D	G	W	T	L	C	K	K	I
Template Known Secondary structure										S				.	.	.	.												T	T								S			.	.	.	.	.	.	.	.	.								T				S						S			T	T
Template Predicted Secondary structure														.	.	.	.																								.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.					.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.										.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	I	S	N	N	P	E	F	A	D	V	R	S	L	E	G	L	S	P	T	N	K	P	S	V	P	I	L	A	I	P	T	T
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	T	C	P	I	V	Y	X	T	Y	I
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S							S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.																					.	.	.	.	.	.	.	80	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions