Job Description P0A9S1 Confidence 100.00% Date Wed Jan 25 15:20:20 GMT 2012 Rank 19 Aligned Residues 325 % Identity 14% Template c2gruB_ PDB info PDB header:lyase Chain: B: PDB Molecule:2-deoxy-scyllo-inosose synthase; PDBTitle: crystal structure of 2-deoxy-scyllo-inosose synthase2 complexed with carbaglucose-6-phosphate, nad+ and co2+ Resolution 2.15 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		T	A	W	F	G	R	G	A	V	G	A	L	T	D	E	V	K	R	R	G	Y	Q	K	A	L	I	V	T	D	K	T	L	V	Q	C	G	V	V	A	K	V	T	D	K	M	D	A	A	G	.	L	A	W	A	I	Y	D	G	V	V	P	N	P	T	I	T	V	V	K	E	G	L	G	V	F	Q	N	S	G	A
Query Conservation																																																			.
Alig confidence																																					.														.
Template Conservation																																					.
Template Sequence		N	F	A	F	G	E	H	V	L	E	S	V	E	S	Y	I	P	R	D	E	F	D	Q	Y	I	M	I	S	D	S	G	V	P	D	S	.	I	V	H	Y	A	A	E	Y	F	G	K	L	A	P	V	H	I	L	R	F	Q	G	G	E	E	Y	K	T	L	S	T	V	T	N	L	Q	E	R	A	I	A	L	G	A
Template Known Secondary structure							T	T		G	G	G	G	G	G	T	S		S	S	S		S								T	T	S				.										T	T	T	S										S	G	G	G		B														T	T
Template Predicted Secondary structure																																					.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		89				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		D	.	.	.	Y	L	I	A	I	G	G	G	S	P	Q	D	T	C	K	A	I	G	I	I	S	N	N	P	E	F	A	D	V	R	S	L	E	G	L	S	P	T	N	K	P	S	V	P	I	L	A	I	P	T	T	A	G	T	A	A	E	V	T	I	N	Y	V	I	T	D	E	E	K	R	R	K	F	V	C	V
Query Conservation			.	.	.
Alig confidence			.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	R	R	T	A	I	V	A	V	G	G	G	L	T	G	N	V	A	G	V	A	A	G	M	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	G	I	A	L	I	H	V	P	T	T	F	L	A	A	S	D	S	V	L	S	I	K	Q	A	V	N	L	T	S	G	K	N	L	V	G
Template Known Secondary structure			T	T								S														G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G										S						T	T	T	S	S								T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	H	D	I	P	Q	V	A	F	I	D	A	D	M	M	D	G	M	P	P	A	L	K	A	A	T	G	V	D	A	L	T	H	A	I	E	G	Y	I	T	R	G	A	W	A	L	T	D	A	L	H	I	K	A	I	E	I	I	A	G	A	L	R	G	S	V	A	G	D	K	D	A	G	E	E	M	A	L	G
Query Conservation
Alig confidence				.																																												.	.
Template Conservation				.																																												.	.
Template Sequence		F	Y	.	Y	P	P	R	F	V	F	A	D	T	R	I	L	S	E	S	P	P	R	Q	V	K	A	G	M	C	E	L	V	K	N	M	L	I	L	E	N	D	N	K	E	F	T	.	.	E	D	D	L	N	S	A	N	V	Y	S	P	K	Q	L	E	T	F	I	N	F	C	I	S	A	K	M	S	V	L	S	E
Template Known Secondary structure				.				S											T	S																			S			S			S	S		.	.	G	G	G			S	S																								T	T
Template Predicted Secondary structure				.																																												.	.
Template SS confidence
		155	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		246	.	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.																	.	.	.	.
Query SS confidence					.	.																	.	.	.	.
Query Sequence		Q	Y	V	.	.	A	G	M	G	F	S	N	V	G	L	G	L	V	H	G	M	.	.	.	.	A	H	P	L	G	A	F	Y	N	T	P	H	G	V	A	N	A	I	L	L	P	H	V	M	R	Y	N	A	D	F	T	G	E	K	Y	R	D	I	A	R	V	M	G	V	K	V	E	G	M	S	L	E	E	A	R
Query Conservation					.	.																	.	.	.	.
Alig confidence					.	.																	.	.	.	.																																																			.
Template Conservation																																																																													.
Template Sequence		D	I	Y	E	K	K	K	G	L	I	F	E	Y	G	H	T	I	G	H	A	I	E	L	A	E	Q	G	G	I	T	H	G	E	A	I	A	V	G	M	I	Y	A	A	K	I	A	N	R	M	N	L	M	P	E	H	D	V	S	A	H	Y	W	L	L	N	K	I	G	A	L	Q	D	I	P	L	.	K	S	D	P
Template Known Secondary structure			T	T	S	S	S	G	G	G	G	G	G	T	T											T	T	T	S	S																				T	T	S	S															T	T	T	T	S	S				.		S
Template Predicted Secondary structure																																																																													.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310
		320	.	.	.	.	.	.	.	.											.	330	.	.	.	.	.	.	.	.	.	340	.	.				.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.															.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.															.	.	.
Query Sequence		N	A	A	V	E	A	V	F	A	.	.	.	.	.	.	.	.	.	.	L	N	R	D	V	G	I	P	P	H	L	R	D	V	.	.	.	G	V	R	K	E	D	I	P	A	L	A	Q	A	A	L
Query Conservation											.	.	.	.	.	.	.	.	.	.															.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		D	S	I	F	H	Y	L	I	H	D	N	D	E	D	N	L	G	M	I	L	L	S	G	V	G	K	P	A	M	Y	N	Q	T	L	L	T	P	V	R	K	T	L	I	K	E	V	I	R	E	G	L
Template Known Secondary structure															S										T	T					B	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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