Job Description P0A9S1 Confidence 28.86% Date Wed Jan 25 15:20:20 GMT 2012 Rank 354 Aligned Residues 124 % Identity 16% Template c2csuB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:457aa long hypothetical protein; PDBTitle: crystal structure of ph0766 from pyrococcus horikoshii ot3 Resolution 2.20 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.					.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																					.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	W	F	G	R	G	A	V	G	A	L	T	D	E	V	K	R	R	G	Y	Q	K	A	L	I	V	T	D	K	T	L	V	Q	C	G	.	.	.	.	V	V	A	K	V	T	D	K	M	D	A	A	G	L	A	W	A	I	Y	D	G	V	V	P	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																					.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.																	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.
Template Sequence		I	V	V	P	K	R	F	V	K	D	T	L	I	Q	C	G	E	K	G	V	K	G	V	V	I	I	T	A	G	F	G	E	T	G	E	E	G	K	R	E	E	K	E	L	V	E	I	A	H	K	Y	G	X	R	I	.	.	.	.	.	I	G	P	N	C	V	G	I	X	N	T	H	V	D	L	N	A	T	F	I
Template Known Secondary structure				S		G	G	G												T										S	S	G	G	G																		T	T				.	.	.	.	.			S	S	S						G	G	G	T					S	S
Template Predicted Secondary structure																																																									.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
																	72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	T	V	V	K	E	G	L	G	V	F	Q	N	S	G	A	D	Y	L	I	A	I	G	G	G	S	P	Q	D	T	C	K	A	I	G	I	I	S	N	N	P	E	F	A	D	V	R	S	L	E	G	L	S	P	T	N	K	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	A	K	K	G	N	V	A	F	I	S	Q	S	G	A	L	G	A	G	I	V	Y	K	T	I	K	E	D	I	G	F	S	K	F	I	S	V	G	N	X	A	D	V	D	F	A	E	L	X	E	Y	L	A	D	T	E	E	D	K	A	I	A	L	Y	I	E	G	V	R	N	G	K	K	F	X	E	V	A	K
Template Known Secondary structure								S						S															T	T				S						T	T		S	S	S											T		S	S									S			S
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
					130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	P	S	V	P	I	L	A	I	P	T
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		R	V	T	K	K	K	P	I	I	A	L	K	A
Template Known Secondary structure				T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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