Job Description P0A9S1 Confidence 100.00% Date Wed Jan 25 15:20:20 GMT 2012 Rank 17 Aligned Residues 297 % Identity 17% Template c1xahA_ PDB info PDB header:lyase Chain: A: PDB Molecule:3-dehydroquinate synthase; PDBTitle: crystal structure of staphlyococcus aureus 3-dehydroquinate2 synthase (dhqs) in complex with zn2+ and nad+ Resolution 2.20 Å

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		1	.	.	.	.	.	.				.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		M	A	N	R	M	I	L	.	.	.	N	E	T	A	W	F	G	R	G	A	V	G	A	L	T	D	E	V	K	R	R	G	Y	Q	K	A	L	I	V	T	D	K	T	L	V	Q	C	G	V	V	A	K	V	T	D	K	M	D	A	A	G	L	A	W	A	I	Y	D	G	V	V	P	N	P	T	I	T	V	V	K
Query Conservation									.	.	.
Alig confidence									.	.	.																							.	.														.						.	.	.	.	.	.
Template Conservation																																		.	.														.						.	.	.	.	.	.
Template Sequence		M	K	L	Q	T	T	Y	P	S	N	N	Y	P	I	Y	V	E	H	G	A	I	K	Y	I	G	T	Y	L	N	Q	F	D	.	.	Q	S	F	L	L	I	D	E	Y	V	N	Q	Y	.	F	A	N	K	F	.	.	.	.	.	.	D	N	V	H	K	V	I	I	P	A	G	E	K	T	K	T	F	E	Q	Y	Q
Template Known Secondary structure									S	S									T	T	G	G	G							T	T		S	.	.														.						.	.	.	.	.	.										S	G	G	G	G		S
Template Predicted Secondary structure																																		.	.														.						.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50							.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		78	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure														.	.	.																																																				.
Query SS confidence														.	.	.																																																				.
Query Sequence		E	G	L	G	V	F	Q	N	S	G	A	D	.	.	.	Y	L	I	A	I	G	G	G	S	P	Q	D	T	C	K	A	I	G	I	I	S	N	N	P	E	F	A	D	V	R	S	L	E	G	L	S	P	T	N	K	P	S	V	P	I	L	A	I	P	T	T	.	A	G	T	A	A	E	V	T	I	N	Y	V	I
Query Conservation														.	.	.																																																				.
Alig confidence														.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	T	L	E	Y	I	L	S	H	H	V	T	R	N	T	A	I	I	A	V	G	G	G	A	T	G	D	F	A	G	F	V	A	A	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	G	V	H	F	I	Q	V	P	T	T	I	L	A	H	D	S	S	V	G	G	K	V	G	I
Template Known Secondary structure									T	T				T	T								S														G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G										S	T	T					T	S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		T	D	E	E	K	R	R	K	F	V	C	V	D	P	H	D	I	P	Q	V	A	F	I	D	A	D	M	M	D	G	M	P	P	A	L	K	A	A	T	G	V	D	A	L	T	H	A	I	.	.	.	E	G	Y	I	T	R	G	A	W	A	L	T	D	A	L	H	I	K	A	I	E	I	I	A	G	A	L	R	G
Query Conservation																																																		.	.	.
Alig confidence																.	.	.																																.	.	.
Template Conservation																.	.	.
Template Sequence		N	S	K	Q	G	K	N	L	I	G	A	F	Y	R	.	.	.	P	T	A	V	I	Y	D	L	D	F	L	K	T	L	P	F	K	Q	I	L	S	G	Y	A	E	V	Y	K	H	A	L	L	N	G	E	S	A	T	Q	D	I	E	Q	H	F	K	D	R	E	I	L	Q	S	L	N	G	M	D	K	Y	I	A	K
Template Known Secondary structure				S	S	S	T	T								.	.	.		S						G	G	G	G	G	G																																S		S							T	T	T
Template Predicted Secondary structure																.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	A	G	D	K	D	A	G	E	E	M	A	L	G	Q	Y	V	A	G	M	G	F	S	N	V	G	L	G	L	V	H	G	M	A	H	P	L	G	A	F	Y	N	T	P	H	G	V	A	N	A	I	L	L	P	H	V	M	R	Y	N	A	D	F	T	G	E	K	Y	R	D	I	A	R	V	M	G	V	K	V
Query Conservation
Alig confidence																					.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	E	T	K	L	D	I	V	V	A	D	E	K	E	Q	G	V	R	.	.	.	.	.	.	K	F	L	N	L	G	H	T	F	G	H	A	V	E	Y	Y	H	K	I	P	H	G	H	A	V	M	V	G	I	I	Y	Q	F	I	.	.	.	.	.	.	.	.	.	.	.	.	V	A	N	A	L	F	D	S	K
Template Known Secondary structure													S	T	T	S	S	S	G	G	.	.	.	.	.	.	G	G	G	G	T	T	T																												.	.	.	.	.	.	.	.	.	.	.	.						T
Template Predicted Secondary structure																					.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.							.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.													270	.	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.							.	340	.	.	.							.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.						.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.						.	.	.	.	.	.
Query Sequence		E	G	M	S	L	E	E	A	R	N	A	A	V	E	A	V	F	A	L	N	R	D	V	G	I	P	P	H	.	.	.	.	.	.	L	R	D	V	G	.	.	.	.	.	.	V	R	K	E	D	I	P	A	L	A	Q	A
Query Conservation																														.	.	.	.	.	.						.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.						.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.
Template Sequence		H	.	.	.	.	.	.	.	.	.	.	D	I	S	H	Y	I	Q	Y	L	I	Q	L	G	Y	P	L	D	G	V	Q	M	V	L	M	R	Q	F	G	D	I	V	V	Q	H	V	D	Q	L	T	L	Q	H	A	C	E	Q
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.													T						B								T	T							B
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		279											280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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