Job Description P0A9S1 Confidence 100.00% Date Wed Jan 25 15:20:20 GMT 2012 Rank 12 Aligned Residues 324 % Identity 21% Template c1ta9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol dehydrogenase; PDBTitle: crystal structure of glycerol dehydrogenase from schizosaccharomyces2 pombe Resolution 1.90 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	L	N	E	T	A	W	F	G	R	G	A	V	G	A	L	T	D	E	V	K	R	R	G	Y	Q	K	A	L	I	V	T	D	K	T	L	V	Q	C	G	V	V	A	K	V	T	D	K	M	D	A	A	G	L	A	W	A	I	Y	D	G	V	V	P	N	P	T	I	T	V	V	K	E	G	L	G	V	F	Q
Query Conservation
Alig confidence																																										.																					.																.
Template Conservation																																										.																					.																.
Template Sequence		F	T	S	P	Q	K	Y	V	Q	G	R	H	A	F	T	R	S	Y	M	Y	V	K	K	W	A	T	K	S	A	V	V	L	A	D	Q	N	V	W	N	I	.	C	A	N	K	I	V	D	S	L	S	Q	N	G	M	T	V	T	K	L	V	.	F	G	G	E	A	S	L	V	E	L	D	K	L	R	K	.	Q	C
Template Known Secondary structure						S						T	T	G	G	G	G						T	T	T		S	S														.	T											T	T								.			S												T	.	T	S
Template Predicted Secondary structure																																										.																					.																.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	G	A	D	Y	L	I	A	I	G	G	G	S	P	Q	D	T	C	K	A	I	G	I	I	S	N	N	P	E	F	A	D	V	R	S	L	E	G	L	S	P	T	N	K	P	S	V	P	I	L	A	I	P	T	T	A	G	T	A	A	E	V	T	I	N	Y	V	I	T	D	E	E	K	R	R	K	F	V	C
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template Sequence		P	D	D	T	Q	V	I	I	G	V	G	G	G	K	T	M	D	S	A	K	Y	I	A	H	S	M	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	S	I	I	C	P	T	T	A	S	S	D	A	A	T	S	S	L	S	V	I	Y	Q	F	Q	K	Y	S	F	Y	.	.
Template Known Secondary structure			T	T									S														T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S		S		S		T	T		S														.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.																					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.											.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	P	H	D	I	P	Q	V	A	F	I	D	A	D	M	M	D	G	M	P	P	A	L	K	A	A	T	G	V	D	A	L	T	H	A	I	E	G	Y	I	T	R	G	A	W	A	.	.	.	.	.	.	.	.	.	.	L	T	D	A	L	H	I	K	A	I	E	I	I	A	G	A	L	R	G	S	V	A	G
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																													.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	P	L	N	P	N	L	I	F	I	D	T	D	V	I	V	R	A	P	V	R	F	L	I	S	G	I	G	D	A	L	S	T	W	V	E	T	E	S	V	I	R	S	N	S	T	S	F	A	G	G	V	A	S	I	A	G	R	Y	I	A	R	A	C	K	D	T	L	E	K	Y	A	L	S	A	I	L	S
Template Known Secondary structure		.	.	.	S	S			S												S																									T	T				T	T	S	S	B
Template Predicted Secondary structure		.	.	.
Template SS confidence
					205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
							235	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.					.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure		.	.	.	.	.													.																							.	.	.	.
Query SS confidence		.	.	.	.	.													.																							.	.	.	.
Query Sequence		.	.	.	.	.	D	K	D	A	G	E	E	M	A	L	G	Q	.	Y	V	A	G	M	G	F	S	N	V	G	L	G	L	V	H	G	M	A	H	P	L	.	.	.	.	G	A	F	Y	N	T	P	H	G	V	A	N	A	I	L	L	P	H	V	M	R	Y	N	A	D	F	T	G	E	K	Y	R	D	I	A	R
Query Conservation		.	.	.	.	.													.																							.	.	.	.
Alig confidence		.	.	.	.	.													.																							.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	T	R	G	V	C	T	E	A	F	E	N	V	V	E	A	N	T	L	M	S	G	L	G	F	E	N	G	G	L	A	A	A	H	A	I	H	N	G	M	T	A	I	H	G	P	V	H	R	L	M	H	G	E	K	V	A	Y	G	T	L	V	Q	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T																							S	S													G	G	G		G	G	G	G	G	S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.				.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure																																											.	.	.																	.
Query SS confidence																																											.	.	.																	.
Query Sequence		V	M	G	V	K	V	E	G	M	S	L	E	E	A	R	N	A	A	V	E	A	V	F	A	L	N	R	D	V	G	I	P	P	H	L	R	D	V	G	V	R	.	.	.	K	E	D	I	P	A	L	A	Q	A	A	L	D	D	V	C	.	T	G	G	N	P	R	E	A	T	L	E	D	I	V	E	L	Y	H	T
Query Conservation																																											.	.	.																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																.	.	.																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	L	E	D	W	P	L	E	D	F	N	N	L	A	S	F	M	A	K	C	H	L	P	I	T	L	E	E	L	G	I	P	N	V	T	D	E	E	L	L	M	V	G	R	A	T	L	R	P	D	E	S	I	H	N	M	S	K	K	F	N	P	S	Q	I	A	D	A	I	K	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.		T	T																T	T				S					T		T	T														T		T	T	S	G	G	G	G	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		381
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		417

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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