 |
Job Description | P0A9S1 | Confidence | 89.94% | Date | Wed Jan 25 15:20:20 GMT 2012 |
Rank | 59 | Aligned Residues | 80 |
% Identity | 10% | Template | c1t6dB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:exopolyphosphatase; |
PDBTitle: miras phasing of the aquifex aeolicus ppx/gppa phosphatase: crystal2 structure of the type ii variant
|
Resolution | 2.15 Å |
|
 |
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
. | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Query Sequence |   |
A | V | G | A | L | T | D | E | V | K | R | R | G | Y | Q | K | A | L | I | V | T | D | K | T | L | V | Q | C | G | V | V | A | K | V | T | D | K | M | D | A | A | . |
G | L | A | W | A | I | Y | D | G | V | V | P | N | P | T | I | T | V | V | K | E | G | L | G | V | F | Q | N | S | G | A | D | Y | . |
L | I | A | I |
Query Conservation |   |
  |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   | . |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   | . |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |
|
|   |
| . | . | . |   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
Template Sequence |   |
V | L | K | E | Y | K | K | L | I | D | E | F | K | V | E | R | X | K | A | V | A | T | E | A | I | R | R | A | K | N | A | E | E | F | L | E | R | V | K | R | E | V | G | L | V | V | E | V | I | T | P | . |
. |
. |
E | Q | E | G | R | Y | A | Y | L | A | V | A | Y | S | L | K | P | E | G | E | V | X | V | V | D | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |
| T | T | G | G | G | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| S | S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | |
|
|
. | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
  |
  |   |
95 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
G | G | G | S | P |
Query Conservation |   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
Template Sequence |   |
G | G | G | S | T |
Template Known Secondary structure |   |
 | T | T |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
  |   |
143 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|