Job Description P30143 Confidence 98.71% Date Thu Jan 5 11:46:07 GMT 2012 Rank 6 Aligned Residues 388 % Identity 15% Template d2a65a1 SCOP info SNF-like SNF-like SNF-like Resolution 1.65

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.
Predicted Secondary structure																																					.	.																																							.	.	.	.
Query SS confidence																																					.	.																																							.	.	.	.
Query Sequence		T	S	F	Q	S	L	C	T	S	L	A	A	R	V	G	S	G	N	L	A	G	V	A	L	A	I	T	A	G	G	P	G	A	V	F	.	.	W	M	W	V	A	A	F	I	G	M	A	T	S	F	A	E	C	S	L	A	Q	L	Y	K	E	R	D	V	N	G	Q	F	R	G	G	P	A	W	.	.	.	.	Y
Query Conservation																																					.	.																																							.	.	.	.
Alig confidence																																					.	.																														.									.	.	.	.
Template Conservation																																																																				.
Template Sequence		T	R	L	G	L	I	L	A	M	A	G	N	A	V	G	L	G	N	F	L	R	F	P	V	Q	A	A	E	N	G	G	G	A	F	M	I	P	Y	I	I	A	F	L	L	V	G	I	P	L	M	W	I	E	W	A	M	G	R	Y	G	G	A	Q	G	H	G	.	T	T	P	A	I	F	Y	L	L	W	R	N	R
Template Known Secondary structure															S	S					T									T	T	T														T																	T	T	T			.	S									S		S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	R	G	L	G	M	R	W	M	G	V	L	F	A	V	F	L	L	I	A	Y	G	I	I	F	S	G	V	Q	A	N	A	V	A	R	A	L	S	F	S	F	D	F	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.																						.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.																						.
Template Sequence		F	A	K	I	L	G	.	.	V	F	G	L	W	I	P	L	V	V	A	I	Y	Y	V	Y	I	E	S	W	T	.	L	G	F	A	I	K	F	L	V	G	L	V	P	E	P	P	P	T	D	P	D	S	I	L	R	P	F	K	E	F	L	Y	S	Y	I	G	V	P	K	G	D	E	P	I	L	K	P	S	L	F
Template Known Secondary structure								.	.	T																					.										T																										T			S	S	S	S		B
Template Predicted Secondary structure								.	.																						.
Template SS confidence
		89	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
				179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	L	V	T	G	I	I	L	A	V	F	T	L	L	A	I	T	R	G	L	H	G	V	A	R	L	M	Q	G	F	V	P	L	M	A	I	I	W	V	L	T	S	L	V	I	C	V	M	N	I	G	Q	L	P	H	V	I	W	S	I	F	E	S	A	F	G	W	Q	E	A	A	G	G	A	A	G	Y	T	L
Query Conservation		.	.
Alig confidence		.	.																																								.	.
Template Conservation																																											.	.
Template Sequence		A	Y	I	V	F	L	I	T	M	F	I	N	V	S	I	L	I	R	G	I	S	K	G	I	E	R	F	A	K	I	A	M	P	T	L	F	I	L	A	V	F	.	.	L	V	I	R	V	F	L	L	E	T	P	N	G	T	A	A	D	G	L	N	F	L	W	T	P	D	F	E	K	L	K	D	P	G	V	W	I
Template Known Secondary structure																		T	T		T	T	T	T																			.	.						T	T				T	T												S			T	T	S	T	T
Template Predicted Secondary structure																																											.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.					310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																																																							.	.	.	.
Query SS confidence																																																							.	.	.	.
Query Sequence		S	Q	A	I	T	N	G	F	Q	R	S	M	F	S	N	E	A	G	M	G	S	T	P	N	A	A	A	A	A	A	S	W	P	P	H	P	A	A	Q	G	I	V	Q	M	I	G	I	F	I	D	T	L	V	.	.	.	.	I	C	T	A	S	A	M	L	I	L	L	A	G	N	G	T	T	Y	M	P	L	E	G
Query Conservation																																																							.	.	.	.
Alig confidence								.	.	.	.	.																						.																					.	.	.	.
Template Conservation								.	.	.	.	.																						.
Template Sequence		A	A	V	G	Q	I	.	.	.	.	.	F	F	T	L	S	L	G	F	G	A	I	I	T	Y	A	S	Y	V	R	K	D	.	Q	D	I	V	L	S	G	L	T	A	A	T	L	N	E	K	A	E	V	I	L	G	G	S	I	S	I	P	A	A	V	A	F	F	G	V	A	N	A	V	A	I	A	K	A	G	A
Template Known Secondary structure								.	.	.	.	.					T	T	T	S	S							T	T	S		T	T	.	S																			T	T																										S
Template Predicted Secondary structure								.	.	.	.	.																						.
Template SS confidence
		246	.	.	.	250	.						.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.						.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.
Query SS confidence														.	.	.	.	.
Query Sequence		I	Q	L	I	Q	K	A	M	R	V	L	M	.	.	.	.	.	G	S	W	G	A	E	F	V	T	L	V	V	I	L	F	A	F	S	S	I	V	A	N	Y	I	Y	A	E	N	N	L	F	F	L	R	L	N	N	P	K	A	I	W	C	L	R	I	C	T	F	A	T	V	I	G	G	T	L	L	S	L	P	L
Query Conservation														.	.	.	.	.
Alig confidence														.	.	.	.	.
Template Conservation
Template Sequence		F	N	L	G	F	I	T	L	P	A	I	F	S	Q	T	A	G	G	T	F	L	G	F	L	W	F	F	L	L	F	F	A	G	L	T	S	S	I	A	I	M	Q	P	M	I	A	F	L	E	D	E	L	K	L	S	R	K	H	A	V	L	W	T	A	A	I	V	F	F	S	A	H	L	V	M	F	L	N	K	S
Template Known Secondary structure		S					T							T	T	S	T	T																																		T	S																									B	T	T
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	W	Q	L	A	D	I	I	M	A	C	M	A	I	T	N	L	T	A	I	L	L	L	S	P	V	V	H	T	I	A	S	D	Y	L	R	Q	R	K	L	G	V	R	P	V	F	D	P	L	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	E	M	D	F	W	A	G	T	I	G	V	V	F	F	G	L	T	E	L	I	I	F	F	W	I	F	G	A	D	K	A	W	E	E	I	N	R	G	G	I	I	K	V	P	R	I	Y	Y	Y
Template Known Secondary structure									T	T	T																T	T	S											T	T		S	S				T
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450