Return to main results Retrieve Phyre Job Id

Job DescriptionP30143
Confidence4.27%DateThu Jan 5 11:46:07 GMT 2012
Rank72Aligned Residues34
% Identity21%Templatec3hslX_
PDB info PDB header:replicationChain: X: PDB Molecule:orf59; PDBTitle: the crystal structure of pf-8, the dna polymerase accessory subunit2 from kaposi's sarcoma-associated herpesvirus
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   428.430.........440.........450.........460.
Predicted Secondary structure 











Query SS confidence 

































Query Sequence  LLLSPVVHTIASDYLRQRKLGVRPVFDPLRYPDI
Query Conservation 


   
    


    
 
  
 
     
  
Alig confidence 

































Template Conservation 
 

 

   






 
 
    


 


 
Template Sequence  LLLCGKTGAFLLKWLRQQKTKEDQTVTVSVSETL
Template Known Secondary structure 

TT

SS

TTT
Template Predicted Secondary structure 











Template SS confidence 

































   166...170.........180.........190.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions