Job Description P0ADT8 Confidence 46.31% Date Thu Jan 5 11:21:50 GMT 2012 Rank 312 Aligned Residues 79 % Identity 16% Template c3ni0A_ PDB info PDB header:immune system Chain: A: PDB Molecule:bone marrow stromal antigen 2; PDBTitle: crystal structure of mouse bst-2/tetherin ectodomain Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		L	S	T	E	P	S	L	R	S	R	V	P	D	L	E	N	Q	V	K	T	L	T	D	K	L	T	N	I	D	N	T	W	.	.	.	N	Q	R	T	A	E	M	Q	Q	K	V	A	Q	S	D	S	V	I	N	G	L	K	E	E	N	Q	K	L	K	N	E	L	I	V	A	Q	K	K	V	D	A	A	S	V	Q
Query Conservation																																		.	.	.
Alig confidence																																		.	.	.
Template Conservation
Template Sequence		L	R	A	Q	A	E	C	R	N	T	T	H	L	L	Q	R	Q	L	T	R	T	Q	D	S	L	L	Q	A	E	T	Q	A	N	S	C	N	L	T	V	V	T	L	Q	E	S	L	E	K	K	V	S	Q	A	L	E	Q	Q	A	R	I	K	E	L	E	N	E	V	T	K	L	N	Q	E	L	E	N	L	R	I	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		162	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		142	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions