Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADT8
Confidence96.51%DateThu Jan 5 11:21:50 GMT 2012
Rank8Aligned Residues51
% Identity18%Templatec3m1uB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative gamma-d-glutamyl-l-diamino acid endopeptidase; PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (dvu_0896) from desulfovibrio vulgaris hildenborough at3 1.75 a resolution
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.. .......50.........60.........70.........80.....
Predicted Secondary structure 




................












Query SS confidence 








. . . . . . . . . . . . . . . .










































Query Sequence  TWVRSGPGD. . . . . . . . . . . . . . . . HYRLVGTVNAGEEVTLLQTDANTNYAQVKDSSGRTAWIPLKQL
Query Conservation 
  
 

  ................   
   
  
  
 

       
  
    
  


    
Alig confidence 








................































.









Template Conservation 
 

 


  
 
  
   






  
 
 
  



 
 
 
 

 
  


  .  


 
  
Template Sequence  SALREVPTLRPXFTAPTRAGQGYPFDXFQRTAVWXGTPVFVGHATADRAWLYVETAF. AAGWXPAADV
Template Known Secondary structure  SSS
SS

BS
TTSTTSSTT

TT
TT

TTSS
SS.
GGG
Template Predicted Secondary structure 










































.



Template SS confidence 



































































   154.....160.........170.........180.........190.........200.........210 .........220
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions